Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1179 ATGGCGCCCAGGTGGAATCGCGAGCAAGGCTGGGAATCCAGCTATGATCCCCCCACACTTATTAATAAGAAAATTAGTATAGCTGAAGCAACAGCAACCTCCCCACTAGTTTACTCTGTTTCCCACCCCACCGTGCCACATACACCAACCTGGCTTCGCTGCCCACCAATCAGATATAAATCACCATCATCAACAGAACTTTGCCTACACCTAGCACTGTGCTTATTATTTGAAATTGATCGCGGGAGGTTGAGATTCCTTTTCCAAAAGGAGCTCAAGAATAGCGACGTAAGCTCCCTCCGGAGGATGGTGCTTCCAAAGAAAGCAGCGGAGGCTTTCCTTCCTATCCTTGAGTCTAAGGAAGGAATTGTCATAAGCATGGATGATATAGATGGTCTTCATGTCTGGAGCTTCAAGTACAGGTTTTGGCCTAATAACAATAGTCGGATGTATGTACTTGAAAACACCGGGGAATTTGTTAGCACACATGGCTTACGTCTTGGAGATTCCATAGTGGTTTATCAAGATAATCAAACCCTTAATTATGTGATTCGAGCTAAAAAGGCTTCTGAGCAAGAAGATTTTATGGCTACATCTGGTGATAACATCAATGATTTCTTTCTACAGGAGTATGAGTTTAACAAGTCAAATAGTTTGAGTTTGATGACCTATCCCACGATGAATGACACAGACATGTCATTCATATATGACACTACATTCTCAAATGATCATTCTCCATTTGACTTCTTGGGTGGATCAATGACCAGCTTCTCAAAGATTGGATCGGTCGAGACCTTTGGCTCTGTGGAGAATTTGTCACTCGATGACTTCTATTAA 837 0.4265 MAPRWNREQGWESSYDPPTLINKKISIAEATATSPLVYSVSHPTVPHTPTWLRCPPIRYKSPSSTELCLHLALCLLFEIDRGRLRFLFQKELKNSDVSSLRRMVLPKKAAEAFLPILESKEGIVISMDDIDGLHVWSFKYRFWPNNNSRMYVLENTGEFVSTHGLRLGDSIVVYQDNQTLNYVIRAKKASEQEDFMATSGDNINDFFLQEYEFNKSNSLSLMTYPTMNDTDMSFIYDTTFSNDHSPFDFLGGSMTSFSKIGSVETFGSVENLSLDDFY 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1179 278 CDD B3_DNA 86 188 IPR003340 GO:0003677
Lele14g1179 278 FunFam B3 domain-containing transcription factor FUS3 84 199 - -
Lele14g1179 278 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 82 201 IPR044800 GO:0003700
Lele14g1179 278 SUPERFAMILY DNA-binding pseudobarrel domain 86 184 IPR015300 -
Lele14g1179 278 Pfam B3 DNA binding domain 88 186 IPR003340 GO:0003677
Lele14g1179 278 Gene3D - 84 202 IPR015300 -
Lele14g1179 278 ProSiteProfiles B3 DNA-binding domain profile. 88 188 IPR003340 GO:0003677
Lele14g1179 278 SMART B3_2 88 190 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1179 Lele-ChrLele14 21278022 21282347 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1179 78 278 B3 DNA Binding Superfamily AT3G26790 53.879 1.38e-74 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele14g1179 B3 5.6e-16 CL0405