Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1148 ATGGAGCGGTCAGTGTGGGATCCACTAAGAGATCAGCCGAACGTTGGAGAAGCCCCCGTGGAGAAAACAGTGTCAGCTGCGGAGCCAGAGATGTCGAACTCAAAAATATCATCAAACAGGAAGCGCGTGTACCAGAAATCGCCGGAGAAGGTGAAGTGCTCGGTGGATGGATGCGAGTTTGACCTGGGGAATTGCCGGGAGTATCACCGGCGGCACAGGGTGTGTCAACCTCACTCCAAGACCTCTTGTGTATTGGTGAAGGGACAGGAACAGAGATTCTGCCAGCAATGCAGCAGATTTCAATCGCTGGACGAGTTTGATGGGTTCAAGCGGAGCTGTAGGAAACGTTTAGAGGGCCATAATAAGCGCAGAAGGAAACCTCGTCCTCCACCTCTCGCATTCTCTGCAGATTACAAAGGACCCAGAATCCTGCAATTTGGGAATCCTAGGAGTGATGATCCTTACACGAGTATGTGGAGCGCTCAACCTGCTCGGAGCTATAATCGTTTCCCACCAATTTTGCAGAAGATTGAGATTGAGCAACAGAGTGAGGAAGGTCGTGCCTTAGGCAGCAACATAGAGAACATGCAGGTGAATTGGTATAATAATGAACGAGTTCCGCCATTAACAGCTGAAGCAGAAGCTGGAATCGGAGATAAGAACCAGAAGATGGCTTCGGAATCTGCTCTCTATCTTCTGTCAGCACTTCAGGCACAGAGTTCGTCCGAGTTCAGTATGGTAGAATCAAGTATAGAGTGTCCAATTCAATCGCAAGCTCCATTTGAAGAAGACGATGGAACCCCAAGATGTTCCAGATTGGGTGAGGATCCTAAAGAAACAAACTTCGATCAGAATGGGATGCTTCAAACGGAGCCCCAGTTGATGGAACACGGTGGGGGTGGGGGATCCCTCTCGTCCCCTTTTATCTGGGAGTAA 936 0.4957 MERSVWDPLRDQPNVGEAPVEKTVSAAEPEMSNSKISSNRKRVYQKSPEKVKCSVDGCEFDLGNCREYHRRHRVCQPHSKTSCVLVKGQEQRFCQQCSRFQSLDEFDGFKRSCRKRLEGHNKRRRKPRPPPLAFSADYKGPRILQFGNPRSDDPYTSMWSAQPARSYNRFPPILQKIEIEQQSEEGRALGSNIENMQVNWYNNERVPPLTAEAEAGIGDKNQKMASESALYLLSALQAQSSSEFSMVESSIECPIQSQAPFEEDDGTPRCSRLGEDPKETNFDQNGMLQTEPQLMEHGGGGGSLSSPFIWE 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1148 311 Pfam SBP domain 53 126 IPR004333 GO:0003677
Lele14g1148 311 SUPERFAMILY SBT domain 51 131 IPR036893 GO:0003677|GO:0005634
Lele14g1148 311 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 38 301 IPR044817 GO:0003677
Lele14g1148 311 ProSiteProfiles Zinc finger SBP-type profile. 50 127 IPR004333 GO:0003677
Lele14g1148 311 MobiDBLite consensus disorder prediction 265 279 - -
Lele14g1148 311 Gene3D - 44 114 IPR036893 GO:0003677|GO:0005634
Lele14g1148 311 MobiDBLite consensus disorder prediction 1 43 - -
Lele14g1148 311 MobiDBLite consensus disorder prediction 257 311 - -
Lele14g1148 311 MobiDBLite consensus disorder prediction 27 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1148 Lele-ChrLele14 21076139 21077242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1148 53 158 SBP-box Gene Family AT5G50670 55.455 1.69e-37 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele14g1148 SBP 1.3e-28 No_clan