Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1132 ATGGGGGATAACTCCAGTAATATTGAAGAGACAGTAATGAATCCCGGCCCTGAAGGGGAAGCTGAAGGAGAAGAGAGAGATCCAGAAAGCAATCCCCTGAATGAGCCACTGCTCAAGAGGAATCGAACACTTTCCACCAATCCTCTTGCTCTCGTCGGAGCCAAAGTTTCCTACATAGAAAGCTTGGACTACGAGATAAATGAGAATGATCTGTTCAAGCATGATTGGAGGAGCAGATCGAGGGTTCAAGTTTTGCAGTACGTACTCTGTAAATGGTCGCTGGCTTTCCTTGTCGGACTTCTTACAGGACTTGTGGCCACCCTCATCAACCTTGCAATAGAGAACGTTGCCGGTTACAAGATTCTCGCTGTCGTCAGATTCATCGAGAATGACCGGTATTTAGCGGGCTTCTTATATTTCACCGGCACGAATTTCTTATTAACATTCGTCGCTGCTCTTCTGTGTGTGTGTTTTGCACCCACAGCAGCTGGACCTGGTATACCTGAAATCAAAGCTTATCTTAATGGCGTCGATACTCCCGACATGTATGGTGCCAAGCCATTGATTGTCAAGATAATTGGAAGCATTGGAGCTGTAGCTGCAGGGCTAGATTTAGGAAAAGAAGGACCATTGGTACATATTGGAGCCTGCATAGCTTCCTTACTTGGCCAAGGAGGCACTGAGAAACACCGGATCAAATGGAGATGGCTTCGATATTTCAACAACGATCGAGACCGGCGAGATCTCATCACATGTGGAGCTTCCTCAGGGGTTTGTGCAGCATTCAGGGCACCTGTTGGAGGAGTTCTGTTTTCTCTAGAGGAGGTGGCAACCTGGTGGAGAAGTGCTCTCCTCTGGAGAACCTTTTTCAGCACAGCCGTGGTGGCGGTAGTGCTCAGGGCCTTCATTGAAGTCTGCAATTCTGGGAAATGTGGCCTCTTTGGCACAGGAGGGTTGGTCATGTTTGATGTCAGCAGTGTCACAGTGAGATACCATGTAATGGATATCATCCCTGTTGTTATCATCGGAATCATTGGTGGGGTATTGGGAAGCCTCTATAACCATCTTCTTCACAAGGTCCTCAGAGTCTACAGTATCATCAATCAGAAGGGGAAAATGCACAAGCTCCTACTCAGTCTCTCAGTTTCACTCTTCACATCAGTGTGCCAATATTGTCTTCCATTCTTTGCAAGATGCATCCCCTGTGATCCGTCGCTTCCAGAAAATGCCTGCCCCACGAATGGACGGTCTGGAAATTTTAAACAGTTCAATTGCCCCAGTGGTCACTACAATGAACTGGCTACTTTATTGCTTACCACTAATGATGATGCTGTTAGAAACATATTCTCAACGAACACTCCACATGAGTATCATCCATCTTCCCTCCTAATTTTCTTTGCACTCTATTGCATATTAGGGCTCATTACTTTTGGGATTGCTGTTCCATCTGGGCTATTCCTGCCAATAATCCTCATGGGTTCTGGTTATGGCCGTCTTCTTGGCCTCTTGATGGGACCTCACACAAAAATTGACCAGGGGTTGTTTGCTGTTCTGGGTGCAGCCTCTCTTATGGCTGGTTCAATGAGAATGACAGTATCAGTCTGTGTGATCTTCCTTGAACTCACCAACAATCTTCTGCTACTTCCCATTACAATGATTGTTCTCCTGATAGCCAAGACAGTTGGGGACAGTTTTAACCCTAGCATCTATGAAATTATACTGCACTTGAAAGGGCTTCCCTTCTTGGACGCAAATCCTGAGCCATGGATGAGAAATCTCACAGTGGGTGAACTTGTTGATGTAAAACAACTGGTGATTACCCTCAATGGAGTAGAGAAAGTGGCTCGTATAGTGGAAGTTCTTAAAAACACTACACATAATGGTTTCCCAGTTGTGGATGAACCGGAGGAAGTTTCCAGAGGAGCGGCCAAGCTTCATGGACTGATCCTAAGAGCGCACCTTGTGTTAGCGCTAAAGAAGAAATGGTTCAATAAGGAAAGAAGGAGGACAGAGGAATGGGAAGTGAGAGAGAAATTTACATGGGTGGACCTGGCAGACAGAGAAGTGAATATTGAGGAAGTGGCAGTGACGAGGGATGAAATGGACTTGTTCGTCGATCTACATCCTTTCACCAATACGACTCCTTTTACAGTTATGGAGAGCATATCGGTGGCAAAAGCGATGGTCCTCTTCAGACAACTAGCACTTCGACATATGCTTGTTTTGCCCGACTATCAACCATCTGGGGTGAGTATCTCCTGTAATTGGGATCTTGACCAGGCAAGATCTATTAGCCCACAACATTCTTACAGTCTTTCCTCACCTGAAGAAAATGTGAGCGCAGACAAGAAAGGAAATAAACCTTCCCAAATAATTGAACGGCCAAGCAGTTTCTTAGAACAAGTCTCCATTTTCATTCCCGACAGAGTTCCTCACTCCCCACTCTGTTTTGTATTACGTGGATCAAAGTACAGGGATGGATCAGAGATACAAGGCGGTGTATACCTATATTCAATCGAGTCCTTTTTTCCCCCTCTTGATATTGCCACATAA 2553 0.4559 MGDNSSNIEETVMNPGPEGEAEGEERDPESNPLNEPLLKRNRTLSTNPLALVGAKVSYIESLDYEINENDLFKHDWRSRSRVQVLQYVLCKWSLAFLVGLLTGLVATLINLAIENVAGYKILAVVRFIENDRYLAGFLYFTGTNFLLTFVAALLCVCFAPTAAGPGIPEIKAYLNGVDTPDMYGAKPLIVKIIGSIGAVAAGLDLGKEGPLVHIGACIASLLGQGGTEKHRIKWRWLRYFNNDRDRRDLITCGASSGVCAAFRAPVGGVLFSLEEVATWWRSALLWRTFFSTAVVAVVLRAFIEVCNSGKCGLFGTGGLVMFDVSSVTVRYHVMDIIPVVIIGIIGGVLGSLYNHLLHKVLRVYSIINQKGKMHKLLLSLSVSLFTSVCQYCLPFFARCIPCDPSLPENACPTNGRSGNFKQFNCPSGHYNELATLLLTTNDDAVRNIFSTNTPHEYHPSSLLIFFALYCILGLITFGIAVPSGLFLPIILMGSGYGRLLGLLMGPHTKIDQGLFAVLGAASLMAGSMRMTVSVCVIFLELTNNLLLLPITMIVLLIAKTVGDSFNPSIYEIILHLKGLPFLDANPEPWMRNLTVGELVDVKQLVITLNGVEKVARIVEVLKNTTHNGFPVVDEPEEVSRGAAKLHGLILRAHLVLALKKKWFNKERRRTEEWEVREKFTWVDLADREVNIEEVAVTRDEMDLFVDLHPFTNTTPFTVMESISVAKAMVLFRQLALRHMLVLPDYQPSGVSISCNWDLDQARSISPQHSYSLSSPEENVSADKKGNKPSQIIERPSSFLEQVSIFIPDRVPHSPLCFVLRGSKYRDGSEIQGGVYLYSIESFFPPLDIAT 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1132 850 MobiDBLite consensus disorder prediction 767 790 - -
Lele14g1132 850 Gene3D - 593 744 IPR046342 -
Lele14g1132 850 Gene3D Clc chloride channel 82 584 - -
Lele14g1132 850 MobiDBLite consensus disorder prediction 1 37 - -
Lele14g1132 850 CDD ClC_6_like 60 582 - -
Lele14g1132 850 Pfam Voltage gated chloride channel 148 562 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele14g1132 850 SUPERFAMILY CBS-domain pair 586 749 IPR046342 -
Lele14g1132 850 SMART cbs_1 604 659 IPR000644 -
Lele14g1132 850 CDD CBS_pair_voltage-gated_CLC_euk_bac 605 744 - -
Lele14g1132 850 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 38 758 - -
Lele14g1132 850 SUPERFAMILY Clc chloride channel 69 584 IPR014743 -
Lele14g1132 850 PRINTS Chloride channel signature 531 550 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele14g1132 850 PRINTS Chloride channel signature 191 210 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele14g1132 850 PRINTS Chloride channel signature 481 501 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele14g1132 850 PRINTS Chloride channel signature 160 177 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele14g1132 850 PRINTS Chloride channel signature 569 583 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele14g1132 850 PRINTS Chloride channel signature 255 274 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele14g1132 850 PRINTS Chloride channel signature 513 529 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele14g1132 850 FunFam Chloride channel ClC3 83 399 - -
Lele14g1132 850 PRINTS Plant CLC chloride channel signature 65 73 IPR002251 GO:0005247|GO:0006821|GO:0016020
Lele14g1132 850 PRINTS Plant CLC chloride channel signature 308 315 IPR002251 GO:0005247|GO:0006821|GO:0016020
Lele14g1132 850 PRINTS Plant CLC chloride channel signature 276 284 IPR002251 GO:0005247|GO:0006821|GO:0016020
Lele14g1132 850 PRINTS Plant CLC chloride channel signature 290 300 IPR002251 GO:0005247|GO:0006821|GO:0016020
Lele14g1132 850 PRINTS Plant CLC chloride channel signature 433 449 IPR002251 GO:0005247|GO:0006821|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1132 Lele-ChrLele14 20992610 20996345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1132 8 750 Ion Channels AT3G27170 76.037 0.0 1167