Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1124 ATGGTTTCTGGCTTGAAAGCAAAGAGCAGGGGAAGTGCTAGTGTTAAAATTAATTACCTCATTCATGTCGAGGAAATCAAACCTTGGCCCCCCTCACAGTCTCTAAGATCCGTTCGTTCTGTACTGATACAGTGGGAGAATGGAGAACGCTATTCAGGTTCTACCGGTCATGTTGTACCCTCGCTGGGTTCTGATACAGATGAAGGAAAAATCAAATTTAACGAGTCGTTCAGACTTCCTGTAACTCTGTTGAGGGATATGTCCATTAGAAGTGGTAATGCTGATGTATTCCAAAAGAATTGCTTGGAGTTCAACTTGTATGAACCCCGAAGAGATAAGACTCTTATGGGTCAGTCGCTGGGAACTGCCATCATAGACTTGGCAGATTATGGTATACTTAAGGAGACCTTGAGCATTAGTGCTCCGATGAACTGCAAGAGGAACTACAAAAACACGGGCCAGCCACTTCTATTCATAAAAATTCAGCCTGTTGCAAAGAGTCGCACTAACTCCTTGTCAAGGGGCAGTTTGTCAAAAGTGGCGCCAAAGGACGTTAATGGTGGTGACTCAACATTGATGAATGAAGAATACACTGAAGAAGCTGGGATTGCCACTCTTTCTGATGATGATGTTTCTTCACATTCATCTGTGGCAGCTGTTGCTTCTGCACTAGGGGACAATAGGTGTATACCTGCTGAACTTGTAGAGAGAAACAGCACAGAAAATGAAAAATCATCAACACTAGGTGCCCAAGATCATGCCTTATTGAGTAGCAGTTCATATCCTTTAGTCGGGGCAAATATTATAAAAAGTGAAAGATTAAAGCATGTAAAGTCAGTGAGGTCACTAGCAGATTCAGCCAGGATTACAGGATCACTTGGTAGTTATCATAATTTGGATGTGAAGGGAATTGGCATTGTTGGAGATGCACCAAACAGTGGAGGAAACATCAGAAGCAGTGACAAAAAAGATGCTAAAATTTATCCAAAGGAAGCGAGAATGACCATTCTAGACAGCAAAGTCGAGCATTTAGAAAACAAGATAAAGATGCTTGAAGGAGAGTTAAGAGAAGTTGCAGCAATCGAGGCTTCTTTATATTCAGTAGTTGCAGAGCATGGAAGCTCCATGAGTAAGGTCCATGCTCCAGCCCGGCGTCTTTCTAGGCTTTATCTCCATGCCTGTAAAGAAAATCTTCGAGCAAGAAGGGCTGGGGCAGCAAAAAATGCTGTTTCTGGGTTAGTACTTGTCGCTAAGGCATGTGGAAATGATGTCCCAAGGCTGACATTTTGGTTGTCTAATATCATTGTTTTGAGGACAATTATATGCCAAACTTCCAAAGACATGGTACAATCAGTTTCTGCAGATTCTAGTGTAAAAGGGAAAAGTGAGGGAGAGAGGAATGGCAAGACAGCACACTCATTACGATGGAAGGGGTCTTCACCTGGTGAAAATGAAAGTGCAGCACCAGAACACAGAGGTTTTGGTAAGTGGGATGAACCCCATGTGTTCACGTCAGCACTGGAAAAGGTAGAAGCCTGGATATTCTCTCGCATAGTGGAATCTATCTGGTGGCAGACTCTGATTCCACACATGCAACCTGATGCAATAGCCTCTAAAAAGGATGTGGACTCTGCCTCAAGGAAAAGCTATAGAAGGATGTCTAGCTCATGTGATCAGGAGCAGGGGAACATTTCACTAGATATTTGGAAGAATGCTTTTAGAGAATCCTGGGATAGGCTCTGTCCAATTCGAGCTGGAGGGCATGAGTGTGGCTGTTTGCCTGTGCTGTCTAGATTGATAATGGAGCAATGTGTGACAAGATTAGACGTGGCTATGTTCAATGCCATTCTTCGTGAATCTGCTGATGAAATCCCTACCGATCCTGTATCTGATCCCATTAGTGATCCCAAGGTTCTCCCCATTCCACCTGGGCAATTAAGCTTTGGAGCTGGGGCACAGCTTAAAACTGCGATTGGGAACTGGTCTAGATGGTTGACTGACTTGTTTGGTATGGATGACGATGACTCATTTGAAGAAAAGGACGACCCTGTTGACAATGATAGGAGACAAGATACATCCTTGAAGTCCTTCCATCTTCTAAATGCATTAAGTGACCTTCTGATGCTTCCCAAGGATATGCTGTTCAGTTCTACTGTCAGGAAAGAGGTATGCCCAAAGTTTATCGCACCACTTATCAAGAGGATTCTTGACAATTTTGTTGCAGATGAGTTTTGCCCTGACCCAATCCCCACAGTTGTTTTTGAAGCTCTGGACTCGGAGGATGATCTCGACGATTGTGGTGAGGAGTGCGTTAGAACCTTCCCATGCAATGCAGCTCCAATTGAGTACTTACCTCCTCCGGCAACTTCCATTGTTGCCATTATTGGGGAGGTTGGAAGTGAACGTCAACTAAGAAGCAGCAGATCATCTGTTCTGAGGAAGGCTTACACGAGTGATGATGAGGTTGATGGACTAAATTCCCCTTTATCTTCTATCCTAATTGATGCCTCCGCGTCTTCAGTGGCTTCAACAAAACCAAGCTGGAAAACCAAAGAAATTCGCAACGGAACTACTGTCAGATATGAACTACTCAGGGACGTATGGATGAGCAGCGAGTAG 2619 0.4395 MVSGLKAKSRGSASVKINYLIHVEEIKPWPPSQSLRSVRSVLIQWENGERYSGSTGHVVPSLGSDTDEGKIKFNESFRLPVTLLRDMSIRSGNADVFQKNCLEFNLYEPRRDKTLMGQSLGTAIIDLADYGILKETLSISAPMNCKRNYKNTGQPLLFIKIQPVAKSRTNSLSRGSLSKVAPKDVNGGDSTLMNEEYTEEAGIATLSDDDVSSHSSVAAVASALGDNRCIPAELVERNSTENEKSSTLGAQDHALLSSSSYPLVGANIIKSERLKHVKSVRSLADSARITGSLGSYHNLDVKGIGIVGDAPNSGGNIRSSDKKDAKIYPKEARMTILDSKVEHLENKIKMLEGELREVAAIEASLYSVVAEHGSSMSKVHAPARRLSRLYLHACKENLRARRAGAAKNAVSGLVLVAKACGNDVPRLTFWLSNIIVLRTIICQTSKDMVQSVSADSSVKGKSEGERNGKTAHSLRWKGSSPGENESAAPEHRGFGKWDEPHVFTSALEKVEAWIFSRIVESIWWQTLIPHMQPDAIASKKDVDSASRKSYRRMSSSCDQEQGNISLDIWKNAFRESWDRLCPIRAGGHECGCLPVLSRLIMEQCVTRLDVAMFNAILRESADEIPTDPVSDPISDPKVLPIPPGQLSFGAGAQLKTAIGNWSRWLTDLFGMDDDDSFEEKDDPVDNDRRQDTSLKSFHLLNALSDLLMLPKDMLFSSTVRKEVCPKFIAPLIKRILDNFVADEFCPDPIPTVVFEALDSEDDLDDCGEECVRTFPCNAAPIEYLPPPATSIVAIIGEVGSERQLRSSRSSVLRKAYTSDDEVDGLNSPLSSILIDASASSVASTKPSWKTKEIRNGTTVRYELLRDVWMSSE 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1124 872 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 12 134 IPR019448 -
Lele14g1124 872 Coils Coil 334 361 - -
Lele14g1124 872 MobiDBLite consensus disorder prediction 454 493 - -
Lele14g1124 872 ProSiteProfiles C2 NT-type domain profile. 7 165 IPR019448 -
Lele14g1124 872 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 330 869 IPR021827 GO:0005643
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1124 Lele-ChrLele14 20954694 20960018 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0596 07 3401805 3402221 Lele14g1124 14 20954694 20960018 CCT
Lele05g0567 05 3327971 3334711 Lele14g1124 14 20954694 20960018 CCT
Lele14g1124 14 20954694 20960018 Lele15g1231 15 7126563 7132026 hybridization
Lele14g1124 14 20954694 20960018 Lele16g1263 16 7148864 7154995 hybridization