Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1121 ATGACGGTATTTTCCGGCAAGCAGGTGTTTCCGGTGGACTACGAGGCCGAGGTGTCGCAGCGCCTCCTCGAAGCTTGTCACTACGGGGATCGGGACTTGGCCTTAGAGTGCATTGCCGATCCATTCGTGGACGTCAACTTCGTCGGCTCAGTGAGCTTGAAGATGAGAAAGGCCGAGCTGGTTCTACACGAGGAATCGGCTAGCGAAGTTCGCGTGGAGTTCGAAGAGTTCAAGACCGACGTCACTGCTTTGTTTCTTGCTGTTCATACGGGGAATGAGAGCCTCGTGAAGAAGCTACTGAGTATGGGAGCTGATGTAAACCAGAAACTCTTCAGAGGCTTTGCAACAACTGCAGCAGCGAGGGAGGGCCACGTTGATATTCTTGAGATCTTGCTTAAAGTTGGAGCATCACAGCCAGCATGTGAAGAAGCTCTTTTAGAGTCAAGCTGCCACGGGCAAGCCAAGTCTGCTGAATTGCTCATGAGCTCTGATTTAATCCGACCCCACGTTGCTGTACATGCTCTTGTGACAGCATGCTGCAGGGGGTTTGTAAATGTGGTAGATACTCTCATAAAGTGTGGCGTGGATTTAAGCGCAGAAGATCGGGTACTTTTGCATTCAGTTAAGCCTGCTCTCCACACAAATGTTGATTGTACTGCACTTGTTGCTGCTGTAATTCATAGGCAGGTGCCAGTTGTTACTTTGCTTCTGCAGAATGGTGCTAGGATAGACACCAAAGTGAGTCTAGGAGCATGGTCATGGGATGTCATAACGGGTGAAGAAATTCGTGTAGGTGCTGGACTGGGAGAAACTTATGCCATAACCTGGTGTGCAATTGAATATTTTGAAAAAAGTGGTGCTATACTTTACATGCTCCTGCAGAATGTTTTCCTCAACAACCCTCACTGTGGAAGAACCCTTCTACACCATGCCATTCTTTGTGGCAATGTTGAGGGTGTGAGGATACTCTTAGAATGTGGTGCCGATGTTGAATCCCCAGTTAAAACAACTCAGAAGACTGAATTCCGTCCATTACACATGTCTTCTCGTCTTGGCTTTTCCACAATCGTTCAATGCCTTATTGCTTTTGGTTGTGATTTGAACTCTATTACAGACGCTGGTGACACAGCTTTGATGATCTGTGCAAAATATAAACAAGAAAAGTGTCTCAAAGTACTCACAATGGCCGGTGCTGATTTTGGCTTAGTCAATACTGCTGGTCATTGTGCAAGTTCAATTGCTGAGTCAAACCAGTGTTCACTTGGTTTTCAGCAGGCATTACTGGATACAATCAGAAAAGGAAAGATACCCACATCTAGCAATATCTCTGTGCTTTCACCCCTTTTATTTGCAGCTGAAGCTGGGGATACGGAGGCATTGAAAACTGTAATTACTTATGGAGGATTCGATCTTGACTATCAAGATGATAATGGCTTCTCTGCTGTTATGGTTTCTGCCTTGAAGGGTCACGTAGAAACGTTTCGGTTGCTTGTATATGCTGGAGCCGATGTAAAGCTATGCAATAAATATGGTGAAACAACAATTGCCCTATCTGAGTTGAACCATAATCACGATTTATTCGAAAAAGTCATGCTTGAATTTGCACTTGAAAAGGGCAATCACAATGCTGGCTTCCATGCTTTACACTGTGCAGCTCGTCGTGGCGACTTGGATGCTGTGAAATTGCTCACTGATAAGGGTTATGGCGTGAATGTTCTTGATCAGGAAGGCTACACTCCGCTCATGTTAGCAGCAAGAGAAGGCCACGGTTCCATTTGAGTGTTCTCTTGGGGTAAGTCAAGCCGAAGAAATGTGATATGCCGTGAGGCAGAGTTGGGACCAAGTTTATCTTTTCGTAGAAATAGGAACACAAGAGGTGATGCTGACGATCCAGGAATATTTAGGGTGTTTACTACCAAGAACAAGGAAGTGCATTTTTTGTGTGATGGGGGGCTTGAAACTGCTGAGCTTTGGGTGAGGGGCATAAAACTTGTGACCAGAGAAGCTAAGTTTGCCGGAGGCAGCTGCGGCAGCAGTAGCAGCAGCACTTCTATAATTTCAAGCTCGAACTCTCAAACAGAATTTGAGAAGCAAAATACAGTCATGTGCTACTCCAAGTTTCTCGTTTCTAGAAAAGGTGCCATTTGGGTTGAGGCTTATCGTTTCAAAAGGCTTAAGAAAGCTCAGGTCAAAGACACTGACATGTCGTCTTCCGTTGTCATGTTATTTGATAATGGCGACATGTGTGTGTGTCATGAGCTACAACTAGTTTTACTTTCAGCAATACATGGGGAGGAAAAATCAGTCCATTCACTGAATCACTGTGTTGATCATTTTTGAGAAAAGTTTCCCGTCCCATATTTGCTGCTTGGAAAGCATCTTGTGTTTCCAGTCTCTGAGGGCTTCCATGAATCTTTGCTTCCTTGCCATTCATTAGAGCTCCAAATCCTGTTTTCCAAAAAGAAAATCAAGATGTTAAATTCCATTAAAATTGCAGAAACTCCAGGAAAGTTAGATGAATCAGAATCTCAAACTGTTGGCGAGCTAGAGCTTAGTGAGCCTGCTCTAAGTACCCCTCCTCTGTGCTCAACATCTCGACCAAATTATTTTCAAGACTGCAAAACAACTCAAAACTCGGACAATGCAAGACCTTCAAGTCCATATGAATGTGTAGAGAGAGACAAATCTTTGAAAAGGGATGGAGAACTTCATCTGGGTAATGGGGAAACTTCAAGTTCAAATGCAAGCATAGCAGGGGAACAATGTTTTAGAAAGGATGAAGAACTTGATGTGATGCTTGAGGTGGATGGTCTAGGCGAACCACGTAAGTTAGTTGTTACACTTGGAATGTTTTATGAAAGTCGCCAGATACTTGCAAAGACATTTTCTGGATCTAAGGAAACAAAGAGAAGAAGTTATGAATTTTTCACAAGCTTCTGTATCTATTTCTTGGCCAGAAATGAGACATATGGGTTAGTTTTGAAAACTACTAGTTGTTTGGATGTAAAGCAAAATGATGCTTATGGTGATATTTCCATCCGGAAGCTCCCGAAAGTGGATCAATCTTTTGGAGTTGACGACCTGTAG 3087 0.438 MTVFSGKQVFPVDYEAEVSQRLLEACHYGDRDLALECIADPFVDVNFVGSVSLKMRKAELVLHEESASEVRVEFEEFKTDVTALFLAVHTGNESLVKKLLSMGADVNQKLFRGFATTAAAREGHVDILEILLKVGASQPACEEALLESSCHGQAKSAELLMSSDLIRPHVAVHALVTACCRGFVNVVDTLIKCGVDLSAEDRVLLHSVKPALHTNVDCTALVAAVIHRQVPVVTLLLQNGARIDTKVSLGAWSWDVITGEEIRVGAGLGETYAITWCAIEYFEKSGAILYMLLQNVFLNNPHCGRTLLHHAILCGNVEGVRILLECGADVESPVKTTQKTEFRPLHMSSRLGFSTIVQCLIAFGCDLNSITDAGDTALMICAKYKQEKCLKVLTMAGADFGLVNTAGHCASSIAESNQCSLGFQQALLDTIRKGKIPTSSNISVLSPLLFAAEAGDTEALKTVITYGGFDLDYQDDNGFSAVMVSALKGHVETFRLLVYAGADVKLCNKYGETTIALSELNHNHDLFEKVMLEFALEKGNHNAGFHALHCAARRGDLDAVKLLTDKGYGVNVLDQEGYTPLMLAAREGHGSIXVFSWGKSSRRNVICREAELGPSLSFRRNRNTRGDADDPGIFRVFTTKNKEVHFLCDGGLETAELWVRGIKLVTREAKFAGGSCGSSSSSTSIISSSNSQTEFEKQNTVMCYSKFLVSRKGAIWVEAYRFKRLKKAQVKDTDMSSSVVMLFDNGDMCVCHELQLVLLSAIHGEEKSVHSLNHCVDHFXEKFPVPYLLLGKHLVFPVSEGFHESLLPCHSLELQILFSKKKIKMLNSIKIAETPGKLDESESQTVGELELSEPALSTPPLCSTSRPNYFQDCKTTQNSDNARPSSPYECVERDKSLKRDGELHLGNGETSSSNASIAGEQCFRKDEELDVMLEVDGLGEPRKLVVTLGMFYESRQILAKTFSGSKETKRRSYEFFTSFCIYFLARNETYGLVLKTTSCLDVKQNDAYGDISIRKLPKVDQSFGVDDL 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1121 1028 ProSiteProfiles Ankyrin repeat region circular profile. 477 504 - -
Lele14g1121 1028 Gene3D - 287 419 IPR036770 -
Lele14g1121 1028 Gene3D - 531 595 IPR036770 -
Lele14g1121 1028 ProSiteProfiles Ankyrin repeat profile. 303 335 IPR002110 GO:0005515
Lele14g1121 1028 SMART ANK_2a 373 402 IPR002110 GO:0005515
Lele14g1121 1028 SMART ANK_2a 443 473 IPR002110 GO:0005515
Lele14g1121 1028 SMART ANK_2a 110 140 IPR002110 GO:0005515
Lele14g1121 1028 SMART ANK_2a 543 572 IPR002110 GO:0005515
Lele14g1121 1028 SMART ANK_2a 170 199 IPR002110 GO:0005515
Lele14g1121 1028 SMART ANK_2a 576 607 IPR002110 GO:0005515
Lele14g1121 1028 SMART ANK_2a 477 506 IPR002110 GO:0005515
Lele14g1121 1028 SMART ANK_2a 216 245 IPR002110 GO:0005515
Lele14g1121 1028 SMART ANK_2a 303 332 IPR002110 GO:0005515
Lele14g1121 1028 SMART ANK_2a 340 369 IPR002110 GO:0005515
Lele14g1121 1028 SMART ANK_2a 79 108 IPR002110 GO:0005515
Lele14g1121 1028 Gene3D - 164 262 IPR036770 -
Lele14g1121 1028 SUPERFAMILY Ankyrin repeat 22 246 IPR036770 -
Lele14g1121 1028 Pfam Conserved region of Rad21 / Rec8 like protein 992 1018 IPR006909 -
Lele14g1121 1028 ProSiteProfiles Ankyrin repeat region circular profile. 79 107 - -
Lele14g1121 1028 PANTHER ANKYRIN REPEAT-CONTAINING 16 592 - -
Lele14g1121 1028 SUPERFAMILY Ankyrin repeat 172 516 IPR036770 -
Lele14g1121 1028 Pfam Ankyrin repeat 303 330 IPR002110 GO:0005515
Lele14g1121 1028 Gene3D - 11 163 IPR036770 -
Lele14g1121 1028 SUPERFAMILY Ankyrin repeat 541 593 IPR036770 -
Lele14g1121 1028 Pfam Ankyrin repeats (3 copies) 445 505 IPR002110 GO:0005515
Lele14g1121 1028 Pfam Ankyrin repeats (3 copies) 532 589 IPR002110 GO:0005515
Lele14g1121 1028 ProSiteProfiles Ankyrin repeat region circular profile. 543 574 - -
Lele14g1121 1028 Gene3D - 420 530 IPR036770 -
Lele14g1121 1028 ProSiteProfiles Ankyrin repeat profile. 543 575 IPR002110 GO:0005515
Lele14g1121 1028 ProSiteProfiles Ankyrin repeat region circular profile. 303 331 - -
Lele14g1121 1028 ProSiteProfiles Ankyrin repeat profile. 79 111 IPR002110 GO:0005515
Lele14g1121 1028 ProSiteProfiles Ankyrin repeat profile. 477 509 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1121 Lele-ChrLele14 20922312 20930580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1121 352 529 Ion Channels AT2G25600 27.660 1.62e-08 57.0