Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1085 ATGAAACTGAGAGCAGACACTATGCTCATGTGGATTGCCCCGGGCATGCTCGACTATGTGAAGAACATGATCACTGGTGCGGCCCAAATGGACGGCGCGATCTTGGTAGTTTCAGGCGCTGATGGGCCAATGCCTCAGACCAAAGAGCACATTCTGTTGGCGAAACAAGTGGGCGTGCCCAATATTGTGGTTTTCTTGAACAAACAGGATCAGAAGAAGGGCCAGATTGATGATGAAGAGCTTCTTCAATTGGTGGAATTGGAAGTTCGGGAGCTCCTGACTCTCTATGAATTCCCGGGTGATGATGTGCCTATTGTTTCAGGTTCGGCATCTTTGGCATTAGAGGCATTGATGGCAAATCCCAAAATCAAGAGAGGAGAGGATCAGTGGCTGGATAAGATTTATGAATTGATGGATGCTGTTGATAGGCGTGTTGAGAGGGGCACAATTGACGTTGGAGACCCTGTAGATTTAGTGGGTTTTAAAGAAACAAGTACAACAACAGTTACTGGGGTTGAAATGCTCCAAAAAACACTTGATGAAGCGATTGCAGGTGATAATATGGGGCTTTTACTTGGGGGCATTCAGAAAACAGACGTTGAAAGAGGAATGGTTATTGCCAAACCCGGCGCCATTACGCCCCATACGAAGTTCACAGCTATTGCGTATGTGCTGAGAAAGGAGGAGGGAGGTTGGCATTCACCATTTTTTGCTGGATACCGACCTCAATTCTACATGAGGACTACTGATGTTACTGGGAAGATCTCTAAAATCATGAATGATAAGGATGAAGAGTCTAAGATGGTTATGCCCGGAGACCGCGTAAAGATGGCTGTAGAGCTGATTTTTCCTGTAGCCTGTGAAAAAGGAATGGGGTTTGCAATCAGAGAAGGTGGAAAGACTGTGGGAGCTGGAGTCATCCACTCTAAAGAGTTTGGGGGATTATGGTTAGATGGTGAAATTTACTGA 969 0.4592 MKLRADTMLMWIAPGMLDYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNIVVFLNKQDQKKGQIDDEELLQLVELEVRELLTLYEFPGDDVPIVSGSASLALEALMANPKIKRGEDQWLDKIYELMDAVDRRVERGTIDVGDPVDLVGFKETSTTTVTGVEMLQKTLDEAIAGDNMGLLLGGIQKTDVERGMVIAKPGAITPHTKFTAIAYVLRKEEGGWHSPFFAGYRPQFYMRTTDVTGKISKIMNDKDEESKMVMPGDRVKMAVELIFPVACEKGMGFAIREGGKTVGAGVIHSKEFGGLWLDGEIY 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1085 322 Gene3D Translation factors 144 247 - -
Lele14g1085 322 Gene3D Translation factors 251 309 - -
Lele14g1085 322 Pfam Elongation factor Tu GTP binding domain 13 144 IPR000795 GO:0003924|GO:0005525
Lele14g1085 322 PRINTS GTP-binding elongation factor signature 25 36 IPR000795 GO:0003924|GO:0005525
Lele14g1085 322 PRINTS GTP-binding elongation factor signature 62 71 IPR000795 GO:0003924|GO:0005525
Lele14g1085 322 CDD EFTU_III 213 307 - -
Lele14g1085 322 Gene3D - 12 143 IPR027417 -
Lele14g1085 322 Pfam Elongation factor Tu C-terminal domain 212 308 IPR004160 -
Lele14g1085 322 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 149 IPR027417 -
Lele14g1085 322 FunFam Elongation factor Tu 251 310 - -
Lele14g1085 322 PANTHER ELONGATION FACTOR TU-RELATED 14 308 - -
Lele14g1085 322 SUPERFAMILY Translation proteins 144 214 IPR009000 -
Lele14g1085 322 FunFam Elongation factor Tu 134 247 - -
Lele14g1085 322 Pfam Elongation factor Tu domain 2 144 206 IPR004161 GO:0005525
Lele14g1085 322 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 1 149 IPR000795 GO:0003924|GO:0005525
Lele14g1085 322 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 212 308 IPR009001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1085 Lele-ChrLele14 20740228 20741684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1085 13 309 Eukaryotic Initiation Factors Gene Family AT5G60390 28.152 4.07e-18 82.8