LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele14g1077	ATGATTGTTTCTAAAGAATCTCAGAACTTAATAACTTACAAGGACGTGTTTGCTGCAGGAGATTCTGTAATTAATGGCTTTGTCTCGGAGCTTCTCAAACAACATGGAGGGTTACAAAATGCGTCAAAGCTGTATTACAACTATGATGGAAAATCTGACTGTTTAAGTCTCACTGAAACTGGAGAAAGTTGTTTCGGGAAGAACATCTGTACCATTGAACCATTTGATACTTCCACCAATTGTGATTCAAGTAGCAGCGTAGTAGAATCTGTTGGTCCATCAAGAGGGGTTGATCCAATCAAGAGTTACTGTAATTCAGAGGTTACTTTTTGTCCAAGTCCTCAGAGTAGTTTCTGTTCTACCACTTTCTATGCTGAAACCAAACAAAGTTTTTCTAATACAGAAATCAGTGAATGTGTTAGAGTTGATAAGTCAAGTGAGATTGGTGGAGTTACTAATTCCTGTTATGGTAATGAGAACAGGAAGAACAGCATCTATAGAGAGAGTCGTGTAAGTGATGTTAGTGATTTGAACAGCAACAGTACTTTAAACAGCTTTTTGTATAGACCACACAAGGCAAATGATTTTTTGTTGTTATTTGGCCAAGAGTTACCAGCATGTCTTAGTTGTCGCCATCAACTTCTAAGCTTGGTTAGCAGCTTCAAAAAGTCTGTCATTCTTTCGTATAGCCCCACTAATAGCTTGCTATGGTTCTATGTGGCAGAGGTGCTTCTTGCTTTGGAGTACTTGCACATGCTGGCGATCATCTACCGAGACCTTAAACCTGAGAATGTCTTAGTGAGAGACGATGGTCACAAAATGCTGTCAGATTTCGACCTGTCTCTGAGAAATACTATTCTGGATTGGAGTAAAGGGAAAGTGAGTCCACTGGTGAGTAGCATAAGAGCAAGGTTAAGGCCCAGACCCATGCCGTTGAATATATTTCAGAACTTAGATGGATTTCCTCGTATTATATTGACTGAACCTACTGGTTCATCTGCAGAGGTGCTTCTATATGGAGGCCAGATTGTTTCCTGGAAGAATGAGCACAAGCAAGAACTTGTTTTCAAGAGCAGTAAGGCTAACTGGAAACAACCTAAAGCAATCAGAGGAGGGATATCAGTCTGCTTTCCTCAGTTTGGGAATATGGGTTCGCTTGATCAACAAGGATTTGCAAGGAACAGATTGTGGTCACTGGACAGAGACCCTTCTCCTTTACCTCCTTCTGACAATCACTCTTCTTTGGATCTCATCTTCAAGTCCACCCGAGAAGATTTAAAGATCTGGCCACGAAGTTTTGATCTCAGGCTTCGCATCACCCTCAGTGCTGGCAAACTCGTTCTGATTCCCCGAGTCAGAAACACTGACAATAAACCTTTATCTTTTACCCTCGCCATCTGCAACTACTTAAGCGTATCAGATATCAGTGAAGTTCGGATTGAGGGGTTGGAGACACTTGATTATCTTGATAATCTGGTGAAAAGAAGCAGATTCACAGAGCAAGCAGATGCAATCACTTTCGACGGCGAGGTGGACAGAGTGTACCTGCGCACACCATCTAAGATCGCGATCATAGACCACGAGAAGAAAAGAACATATGAACTGAAGAAGAACGGCATGGCAGATGCAGTGGTGTGGAATCCATGGGAGAGAAAAGCGAAGGCGATGTGTGATATGGGAGATGAAGATTACCAGAGCATGATATGCTTGAGTTGTGCAGCGATTGAGAATCCAGTGGTGTTGAAGCCTGGTGAAGAGTGGAAGGGATATCAGGAGCTCTCCACCGTGTCCTCAAGCTATTGCAGTGGACAATTGGATCCTCGTAAGGTCATTTATGGCTTTCACTGA	1848	0.4248	MIVSKESQNLITYKDVFAAGDSVINGFVSELLKQHGGLQNASKLYYNYDGKSDCLSLTETGESCFGKNICTIEPFDTSTNCDSSSSVVESVGPSRGVDPIKSYCNSEVTFCPSPQSSFCSTTFYAETKQSFSNTEISECVRVDKSSEIGGVTNSCYGNENRKNSIYRESRVSDVSDLNSNSTLNSFLYRPHKANDFLLLFGQELPACLSCRHQLLSLVSSFKKSVILSYSPTNSLLWFYVAEVLLALEYLHMLAIIYRDLKPENVLVRDDGHKMLSDFDLSLRNTILDWSKGKVSPLVSSIRARLRPRPMPLNIFQNLDGFPRIILTEPTGSSAEVLLYGGQIVSWKNEHKQELVFKSSKANWKQPKAIRGGISVCFPQFGNMGSLDQQGFARNRLWSLDRDPSPLPPSDNHSSLDLIFKSTREDLKIWPRSFDLRLRITLSAGKLVLIPRVRNTDNKPLSFTLAICNYLSVSDISEVRIEGLETLDYLDNLVKRSRFTEQADAITFDGEVDRVYLRTPSKIAIIDHEKKRTYELKKNGMADAVVWNPWERKAKAMCDMGDEDYQSMICLSCAAIENPVVLKPGEEWKGYQELSTVSSSYCSGQLDPRKVIYGFH	615

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele14g1077	615	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	255	267	IPR008271	GO:0004672\|GO:0006468
	Lele14g1077	615	PANTHER	APOSPORY-ASSOCIATED PROTEIN C-RELATED	319	598	-	-
	Lele14g1077	615	Pfam	Aldose 1-epimerase	323	593	IPR008183	GO:0005975\|GO:0016853
	Lele14g1077	615	Pfam	Protein kinase domain	236	281	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele14g1077	615	ProSiteProfiles	Protein kinase domain profile.	54	470	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele14g1077	615	CDD	D-hex-6-P-epi_like	323	594	IPR025532	-
	Lele14g1077	615	FunFam	Serine/threonine-protein kinase OXI1	224	285	-	-
	Lele14g1077	615	Gene3D	-	321	601	IPR014718	GO:0030246
	Lele14g1077	615	SUPERFAMILY	Galactose mutarotase-like	318	593	IPR011013	GO:0003824\|GO:0005975\|GO:0030246
	Lele14g1077	615	Gene3D	Transferase(Phosphotransferase) domain 1	236	284	-	-
	Lele14g1077	615	SUPERFAMILY	Protein kinase-like (PK-like)	232	283	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele14g1077	Lele-ChrLele14	20683516	20692127	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele14g1077	238	286	AGC Kinase Gene Family	AT5G55910	89.796	2.23e-21	95.9

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_RSK-2	Lele14g1077		Aldose_epim	1.1e-56	CL0103