Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1059 ATGGAGTCCGGCAATCTTTTCTTCGAGTCTTCCGCTTGCCGCGGGACCATGTTGTTCCTCCGAAATGGCGATATCACATTTGGAGGAAGTTCGATGATGAGCACGGATGAAACCTCAAAGAAACGACCTTTCTTCAGCTCACCGGAAGAACTGTTCGACGAGGAATATTATGATGAGCAACTGCCCGAGAAGAAGCGTCGCCTCACTCCCGAGCAGGTTCATCTGTTGGAGAAAAGCTTTGAGGCAGAGAACAAACTGGAGCCTGTAAGGAAGACCCAGTTGGCCAATAAGCTGAGATTGCAGCCAAGGCAGGTTGCCGTGTGGTTTCAGAACCGCAGGGCTCGGTGGAAGACCAAGCAACTTGAAAGGGATTTTGATATTCTCAAGTCTTCCTACGACTCACTCCTTTTAAAATATGAATTCACTGTGAAGGAGAATGAAAAGCTTAAATCCGAGGTGGTATCACTGAATGAGAAGCTTGAAGCAAAGGATGTACCTAGAGCACCGATATTTGATCAAACTATTGACCCTCTTCCAGTGGATACATCCCAATTTTCAGCCCTACCGTTCAGCACAAGGGTGGAGGATCGTCTGAGCACGGGAAGTGGTGGAAGCTCAGTTGTGGACATGGATAGCTCACAGCTTGTTGTGGACAGTGGTGATTCATACTTTCCGGTGGACAGTTATACCGGATACATGGCCTGTGTCATTGGGGTTCAGTCGGAGGATGATGGTGGAAGTGACGATGGACGGAGCTACTTCTCAGACGTGTTTGTGGCCCCTGAATCACATGGACAAAACCACGAGGCAGGGGATGGATTGGGTTGGGCAAAGAATAGCAGAACTTCCGGTTCAGGTGGAGTGGATCCCTGGATCTGGGAGACAACGGGTCTAAGAAGAGTTTAA 906 0.4901 MESGNLFFESSACRGTMLFLRNGDITFGGSSMMSTDETSKKRPFFSSPEELFDEEYYDEQLPEKKRRLTPEQVHLLEKSFEAENKLEPVRKTQLANKLRLQPRQVAVWFQNRRARWKTKQLERDFDILKSSYDSLLLKYEFTVKENEKLKSEVVSLNEKLEAKDVPRAPIFDQTIDPLPVDTSQFSALPFSTRVEDRLSTGSGGSSVVDMDSSQLVVDSGDSYFPVDSYTGYMACVIGVQSEDDGGSDDGRSYFSDVFVAPESHGQNHEAGDGLGWAKNSRTSGSGGVDPWIWETTGLRRV 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1059 301 SUPERFAMILY Homeodomain-like 57 121 IPR009057 -
Lele14g1059 301 Coils Coil 139 159 - -
Lele14g1059 301 CDD homeodomain 64 120 IPR001356 GO:0003677
Lele14g1059 301 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 50 196 IPR045224 GO:0003700
Lele14g1059 301 SMART HOX_1 62 123 IPR001356 GO:0003677
Lele14g1059 301 Gene3D - 58 125 - -
Lele14g1059 301 ProSitePatterns 'Homeobox' domain signature. 94 117 IPR017970 GO:0000981|GO:0006355
Lele14g1059 301 ProSiteProfiles 'Homeobox' domain profile. 59 119 IPR001356 GO:0003677
Lele14g1059 301 Pfam Homeobox associated leucine zipper 119 160 IPR003106 GO:0006355|GO:0043565
Lele14g1059 301 Pfam Homeodomain 64 117 IPR001356 GO:0003677
Lele14g1059 301 FunFam homeobox-leucine zipper protein ATHB-6-like 67 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1059 Lele-ChrLele14 20561212 20563526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1059 1 276 Homeobox Transcription Factor Family AT3G01470 54.225 3.66e-84 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele14g1059 Homeodomain 1.7e-16 CL0123