Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1058 ATGATGGAACTCACCGATTCCGGCGACGAACTCAGGGACCGCAAGCTGCCTCAGGATTCTCGCTCTGGACTCGGAATCGACCTCAATGAGATTCCCTCTCCTTCTTTTGCCGAAACCCTACCGGACTCCATCGACATCGTACGCGCCTACCACGAGAATCCGGTGCCTCCGCCCGGTGGACCGGCGGGGATTCCCGGTGACGTCCGCGGCTCCACTTGTGGTGCCTGCGGTAAGCCTGAGGCGCGGGGTCATGTTGTGGTCTGCGACGGGTGTGAGCGCGGCTACCATTTGGGCTGCGCGGGAATGCGTGGGCGCCAGGCCGTAAACCTTGACGAATGGGTCTGTGGGGAGTGTGTGTCCAGTGGGGTGAAGAGTAAGCGTTGGCCATTGGGTGTCAAGTCCAAGCATCTTTTGGATATCAATGCTTTGCCACCCAGCGATGCTGACGGCGAGGGTAGTGAAGAATTGCAGGATTTGAGAAAGCACGCTCAGGGTCATAATTCTTTCAGTGCCAACTCATTTGGTGCCCCATTGACAAATTCAAACTTCTACAATGGTAATGCTATTGGCTGCTTCCAAAGAGCATCTGGAGTTGTGACACATGCTGATAGAGTGGGTTTTGAGGATGTATTGAATCGTACGCAATCAGTGAGTAGAAATTTTGAGGAGGTAGGTATGGGTTTGCCTCCTGGAAGGCACAGGAATAGTAAAAATACCACTACCGGGAATCCAGGAGAGATGATTTTGCAAGCTCTCAGGGATTTTATATCTGAAAGGCATGGTGTTCTGGAGGAAGGTTGGAAAGTGGAGTTTAGACAACCAATGAGCAGCTCTGAGCTGTATGCTGTTTACCGTGCACCAGATGGGAAGATTTTTGATTCTGTGTTTGAAGTAGCGTGTTATCTGGGATTGATGCCTGGCTACAACTCTCTGGAGTCTGAAACGAGGAATGATAGGCCTGTCTCTTCAGTAGGTGGGTCTCACATTACCAGAAAAAGAAAGTCAACTAGACTTCCCGTTGCTAATGGCTTTGCTGAAAGAAGGGAAGGCTTTACCAATAGTTGTTTTAAAGATCCTCCTTCGGCTGCTGCAAGTGCAAAGTGTGCTAATGCATGTGCGAACATATCAGAAGCCACATTAAGTGGAAGGAGAGAGGACGATCACTCTAGCCCTCAGCAATCTGCTGATGGCCTTCCTTTACAGTTTGAAGATTTTTTTGTTCTTTCTTTGGGAAAGGTTGATGATAGACCTTCATATTGTGATGCTAACATTATTTGGCCCGTAGGTTATAAATCTTGCTGGCATGATAAAATTACAGGCTCCATTTTTACATGTGAAGTTCTGGATGGTGGTGATTCTGGACCTATGTTTAGGGTCAGAAGGTGTTCCTGTTCTGATTTTTCTATTCCAGATGGGTCAACCATCCTCTCAATGTCCAACCTTTGTCAATTTGTGAGTCAAAGCAATGAAGGTGACACAAAGATGAATGATTATATGGAACGTGATGTTGATGAAAGTATCCAGATGCTCCTAGACGACTCTTGCAATCCAACAGAAAATGATGTCTTGAGTTGTCTTGAAAGTTGCTCTAGTGAAGCACATGATAGCCATACATTAGATGTATTGCAGGCTGCAGCTGGTCCAGGTCAAGATGAAACTTATAATTTGTCTGACGACTTGGGGTCAATTGGTGAGATGGTGGTGGAAGACTGTTCGTCATCCTCAGCATGGAAAGATATTTCCCAAAAATTAGTTAATGCTTGCAGTGAAATATGCAAGCAGAAAGGGACTTTAAAGCTCTATTGTAAACATGCTGAAAGTGAAACATGCGTACATAAATGGGACATATGGAATGGCAAAAATGAAACACACCCCACTTCATTTGCTAAATTTTGCGGGTCCCCTGCTCTTGGTATCCCAGACATGGTTTATGCAGATAATGATCTTGAAAATTTGTATGGGGCCTTAAGAAAATGGTTGGAGCAGGATAGATTTGGGTTAGATGTTGGGTTTGTCCAAGAAGTACTTGAACTACTTCCTGGTGTTGAAGCATTCTCACAGTATGAATTTCTGAATACTAGAAGTAATGGCTCTTCTTTGCTAACAGTTGGAAGTGGGTTCTTAGTGGCTGATTGGAGAGGCAGATCCCAATATCAGGAAGAAGCAGAGCAAGGTTTATATAGGAGACACAAGAAAGTAAAATTGGCCAAAGAATGTGTTAAGGAAGATCATTGTCCACCTCCTGGGAAGCCGCTATCCTTTAGGGTTCCTTTTGAACTTGTTGGTGATGTTTTTCAGGCTTTGGAGCTATTACGCAGATTTCATGAAATTTTGGGCCTGAAGGAACCTTTGTCATTGGAAGAGATGGAGAAGGAACTCATCAACCCATGGTTTAATGGGTCAGTCTTTAGTGAAAAACTTGAGGGTGATGGCAGTGGTGGATCAATCTTATCCCCAGACTGTGAAGCTGCTCCTTCAATTTCTGCTGAAAGTCCCCATGCATTTATTCAAGTGGAAACCGAAGCCATGAAAGAGGCAGCTCAAGTTAAGCTTGCATCGTTCACTTACACGAGATGCTTTGGTGCATCATTGACAAAGGCTCATAATTCCTTGCTGGAGGTTTTAATAGGTGAACTGCAATCCAAAGTGGCTGCCCTAGTGGATCCAAATTTTGATCCTGGAGAGCTGAGAACAAGACGGGGAAGAAGGAAAGACATAGATAGTACTGTTCCTGCCAGACGAGCCAAGCTCAATATGCTTCCTATTAATGAACTAACTTGGCCTGAATTGGCTCGTAGATACATATTAGCGGTCTTATCAATGGATGGTAACCTTGACTCACCAGAGATTACTGCACGGGAAAGTGGTAAAGTATTTCGCTGCTTACAAGGTGACGGTGGTTTGCTGTGTGGCTCCCTTACTGGTGTGGCTGGGATGGAAGCAGATGCATTGTTGCTTGCGGAGGCTACAAAGAAAATTTTTGGTTGTGTGAGCAGTGAAAGTAATGTGCTTACCTTTGAAGATGAGGAGTTAGATGCAAAGGATGCTTGTGAGAAAACTTTGTTGAATGATGGTAATATTCCAGAATGGGCACAGCTGCTAGAACCTGTAAGAAAACTACCAACAAATGTGGGAACCAGAATCAGAAAGTGCGTCAATGATGCCTTACTTAAGGATCCACCTGAGTGGGCTCGAAAAATACTGCAACACTCGATTAGTAAGGAAGTGTACAAGGGCAATGCATCTGGACCTACAAAGAAAGCAGTTCTTTCTGTGTTGGCCGATGTATGTGGTGAAGGATCGCAACGGAAGCCCAATAAAACAAGGAGAAAAAAGACTGTAATATCTATTTCTGACATTATCATGAAACAATGTCGCATTGTATTACGCCGTGCTGCTGCAGCAGATGATTCCAAGGTTTTTTGCAATTTACTGGGACGAAAATTGATAAATTCTTCTGATAATGACGATGAAGGGCTTCTTGGATCTCCAGCCATGGTGTCCCGTCCTCTTGACTTCAGGACCATTGACCTCCGACTGGCTGCTGGGGCTTATGGTGGATCTCATGAAGCTTTTCTTGAGGATGTTCATGAGCTGTGGAACAATGTTCATATTGCTTTTGGGGATCAACCTGATTTAGTTGAGCTGGCTGAGAAATTATCTGAGAATTTTGAGGAGTTGTATGATAGTGAGGTTTTAACTTATGTGCAAAGGTTTGGAGAGTATGCCAAATTGGGAAACTTAAGTGTGGAAAAAAGAAAGGAAGTGGAAAAATTTCTTGCATCAGCTAGTGAAATTCCGAAGGCCCCTTGGGATGAGGGAGTCTGTAAAGTATGTGGTATTGATAGGGATGATGACAGTGTTTTGCTATGTGATACCTGTGATGCTGAGTATCATACTTATTGCTTGAATCCTCCGCTAGCAAGGATCCCTAAAGGAAACTGGTACTGCCCTTCTTGTGTTGACAGTAAACATGCAGTTCAAGATGTTCTACAAGGTTCAAAACCTATTGGCAAACCTAGAAGTAAAAAATTCAAGGGGGAGGTTACTTCGCTTTACTTGGAGGCTCTCTCTCATCTACTATCTGTAATGGAAGAAAAAGAATACTGGGAGTACAGTGTGGGCGAGAGAACTATCCTTCTCAAGTTTTTATGTGATGAGTTGCTCAACACTTCCCTCATACGCCAGCACCTTGAGCAATGTGCTGAGTCATCTTCTGAATCACATCAAAAGTTGCGTGCACTTTCTACAGAGTGGAAAAGCCTGAAAATTAGAGAAGAAATATTATCCAGTAAAGCTGCAAAAATTGACACATGCTCAGTAGCAACTACTGGAGAAGTCCGCAAGGAGGGGCTTACTGGATCAGTATCAAGTCCTGGTAAATGCCTGGTTCAGCCACATAGTGCAAGTGACAGTCCTAACAATTTTGGGGTATTTGCTGATAGTTTGTATTTGGAAGAGATAAATAAAGAGAAAAATGGGTTTAACAGTGTTGATAAAAGTGTATCTACAACAAATTCAGAGACTGATAGTCAAAGCAGGAATCCCATGAATGCGGAGGGTCAGTTGAAGAATGTCTGTACAGCTGTGGATGGCAGTCAGTTGCCTATAAGTATGACTTCCTGTGTGGATTCACAACGTAGTGATAAGCCTAGTAATCCTTTTTCAATGGCAAATAACATGCCTCAAGAAACTAACAGCTCTGGTGGAGCAGTTCATATCCAGGGTAACCGGCTGAAATGTGAGGGAAGAGATACATCTCTTGACCTGCAAGAAAAAGGTGTCCCTTTTGATGTTCCTAAGTCTTCTGTAAATGAATCAGAACCATATGACCTCGAGCTCAATGCTATCAGACATGATATCTCACTTCTGCAAGAGTCAATAACTAGTATTGGATCACAGCTGCTAAAGCTTTCTGTTCGTCAGGAATTTTTGGGAATTGATTCACTTGGTCGCTTTTACTGGGCTTCCGCGATGCCTGGAGGATGTCCGTGTATACTTGCTGATTCAACTGCTCTGATGTTGCATGTGGGAAGAAAGGCCAATAGCAGAGACCCTGTGGACAATATTTCTGCTATGAAGAATTGTGGACTATCTGGCAAGGATAGCTATCAGATGTTAGGGCTGATGAAAGATTTATCTCCTTTAACGTCTCTATCAAGTAATACTTTAGGCTGTAATTCACCATGGGTTGCTTATCAAACTGATTCTGAAATTGAAGAGCTCTTATGTTGGCTGAAGGATATTGACCCTAGAGAAAGAGAACTTAAAGATTCAATTATGATTTGGCAGAAGTCAAGATTCCAAGAGCTTATTCATATGCAGAATGAACATCAGGTTGAGCCACAAGGACCTTGCCCTTTACCTGGGGATAGAGAGAAAATAGTGTCTGATTCTCTTGTTACAAAGGCAACCTCCTTGTTAGAGAAGAAATATGGCCCATTCTTAGAGTTGGGTACCCTTGAGGCGTTGAAGAAGAGGGGTAAAAAGGTAAGAGCATCTAATGATGATAAGTTGTATAGGTGCCAATGCCTAGAACCCATATGGCCTTCTAGGCAACACTGCATGTCTTGTCACAAAACCCTTTTGAATGATGTTGAACTGGAGGGACACAATGATGGCAAATGTAGTGCTGCTTTGCCTGCCTCAGAGAAGAATAAAGATATTGGTGGATCTTCTAAAGGGAGAGGTAATTTGAAATTTGAGACCACCAACGAGAAAGTAAGAGGTAATGCAGAAACAGGTGGAACCTTGACGAGTGGTGGTTCTGAGCTTAGCTCAAGATTGATTAAGTTTTCAAATCAAGAATCAACATGTCCATATAACTTTGAAGATGTCTGTTCCAAGTTTGTGACTGAAGACTCCAACGAGGAACTTATTAAAGAAATAGGTCTTATTGATTCTGATGGGATCCCATCCTTTGTTCTTTCTATATCTCCTTATGTAAGTGATTCTACAGTTATGCTAATATCAAACAAAAAGGCTGAATATGTTGCTGGTGGGTCCAAGGCTTCTGAAGGGCATATTCCTAAAGGAAGTGGCATGTGCCATGACCATATATCGGGAATTCCTATTCGAAGATCCAGTGTTTATGAAAACAATAAAGCAGGAAAATCCAGTAGATCAACTTTGGGATCTTCAGGGCAAAGGGATGGAAAATCTTTATTTTCTGTTCCTGCCTCACTAGTGGGCACTGACAGCTGTTGTGTGGTACCTCAATCTTCATTGAGACCATTGGTTGGAAAAGTTTCGCATATTTTGAGGCTACTGAAGATTGGCCTACTTGATATGGACGCTGTGCTCCCTGAAGTTGCTTTGAGGACATCAAAAGCACTGTTGGAAAGGAGACAGGCTTGGCGGTCATTTGTTAAATCTGCAAGGACCATATATGAGATGGTTCAGGCGACAATCACACTGGAGGACATGATTAAGACAGAGTACTTAAGAAATGACTGGTGGTACTGGTCATCACTCTCAGCGGCTGCCAAATCTTCTACTTTGTCATCCCTTGCCCTTCGAATATACACCCTTGATTCAGCCATTATATATGAGAAAATGTCAAGTTCAAGTTTTACTGATTGCTCAGAATCTTCTGTGGTAGCAGAACAGAAAGCATTAGCCACTTTGGATACGGAGAAATCCAAAGCAATACGGAAGTCAAGCCGGAAAAGGAAGGAACCAGATGGTTAA 6690 0.4324 MMELTDSGDELRDRKLPQDSRSGLGIDLNEIPSPSFAETLPDSIDIVRAYHENPVPPPGGPAGIPGDVRGSTCGACGKPEARGHVVVCDGCERGYHLGCAGMRGRQAVNLDEWVCGECVSSGVKSKRWPLGVKSKHLLDINALPPSDADGEGSEELQDLRKHAQGHNSFSANSFGAPLTNSNFYNGNAIGCFQRASGVVTHADRVGFEDVLNRTQSVSRNFEEVGMGLPPGRHRNSKNTTTGNPGEMILQALRDFISERHGVLEEGWKVEFRQPMSSSELYAVYRAPDGKIFDSVFEVACYLGLMPGYNSLESETRNDRPVSSVGGSHITRKRKSTRLPVANGFAERREGFTNSCFKDPPSAAASAKCANACANISEATLSGRREDDHSSPQQSADGLPLQFEDFFVLSLGKVDDRPSYCDANIIWPVGYKSCWHDKITGSIFTCEVLDGGDSGPMFRVRRCSCSDFSIPDGSTILSMSNLCQFVSQSNEGDTKMNDYMERDVDESIQMLLDDSCNPTENDVLSCLESCSSEAHDSHTLDVLQAAAGPGQDETYNLSDDLGSIGEMVVEDCSSSSAWKDISQKLVNACSEICKQKGTLKLYCKHAESETCVHKWDIWNGKNETHPTSFAKFCGSPALGIPDMVYADNDLENLYGALRKWLEQDRFGLDVGFVQEVLELLPGVEAFSQYEFLNTRSNGSSLLTVGSGFLVADWRGRSQYQEEAEQGLYRRHKKVKLAKECVKEDHCPPPGKPLSFRVPFELVGDVFQALELLRRFHEILGLKEPLSLEEMEKELINPWFNGSVFSEKLEGDGSGGSILSPDCEAAPSISAESPHAFIQVETEAMKEAAQVKLASFTYTRCFGASLTKAHNSLLEVLIGELQSKVAALVDPNFDPGELRTRRGRRKDIDSTVPARRAKLNMLPINELTWPELARRYILAVLSMDGNLDSPEITARESGKVFRCLQGDGGLLCGSLTGVAGMEADALLLAEATKKIFGCVSSESNVLTFEDEELDAKDACEKTLLNDGNIPEWAQLLEPVRKLPTNVGTRIRKCVNDALLKDPPEWARKILQHSISKEVYKGNASGPTKKAVLSVLADVCGEGSQRKPNKTRRKKTVISISDIIMKQCRIVLRRAAAADDSKVFCNLLGRKLINSSDNDDEGLLGSPAMVSRPLDFRTIDLRLAAGAYGGSHEAFLEDVHELWNNVHIAFGDQPDLVELAEKLSENFEELYDSEVLTYVQRFGEYAKLGNLSVEKRKEVEKFLASASEIPKAPWDEGVCKVCGIDRDDDSVLLCDTCDAEYHTYCLNPPLARIPKGNWYCPSCVDSKHAVQDVLQGSKPIGKPRSKKFKGEVTSLYLEALSHLLSVMEEKEYWEYSVGERTILLKFLCDELLNTSLIRQHLEQCAESSSESHQKLRALSTEWKSLKIREEILSSKAAKIDTCSVATTGEVRKEGLTGSVSSPGKCLVQPHSASDSPNNFGVFADSLYLEEINKEKNGFNSVDKSVSTTNSETDSQSRNPMNAEGQLKNVCTAVDGSQLPISMTSCVDSQRSDKPSNPFSMANNMPQETNSSGGAVHIQGNRLKCEGRDTSLDLQEKGVPFDVPKSSVNESEPYDLELNAIRHDISLLQESITSIGSQLLKLSVRQEFLGIDSLGRFYWASAMPGGCPCILADSTALMLHVGRKANSRDPVDNISAMKNCGLSGKDSYQMLGLMKDLSPLTSLSSNTLGCNSPWVAYQTDSEIEELLCWLKDIDPRERELKDSIMIWQKSRFQELIHMQNEHQVEPQGPCPLPGDREKIVSDSLVTKATSLLEKKYGPFLELGTLEALKKRGKKVRASNDDKLYRCQCLEPIWPSRQHCMSCHKTLLNDVELEGHNDGKCSAALPASEKNKDIGGSSKGRGNLKFETTNEKVRGNAETGGTLTSGGSELSSRLIKFSNQESTCPYNFEDVCSKFVTEDSNEELIKEIGLIDSDGIPSFVLSISPYVSDSTVMLISNKKAEYVAGGSKASEGHIPKGSGMCHDHISGIPIRRSSVYENNKAGKSSRSTLGSSGQRDGKSLFSVPASLVGTDSCCVVPQSSLRPLVGKVSHILRLLKIGLLDMDAVLPEVALRTSKALLERRQAWRSFVKSARTIYEMVQATITLEDMIKTEYLRNDWWYWSSLSAAAKSSTLSSLALRIYTLDSAIIYEKMSSSSFTDCSESSVVAEQKALATLDTEKSKAIRKSSRKRKEPDG 2229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1058 2229 ProSitePatterns Zinc finger PHD-type signature. 73 118 IPR019786 -
Lele14g1058 2229 ProSitePatterns Zinc finger PHD-type signature. 1276 1320 IPR019786 -
Lele14g1058 2229 MobiDBLite consensus disorder prediction 1 30 - -
Lele14g1058 2229 SUPERFAMILY FYVE/PHD zinc finger 1262 1325 IPR011011 -
Lele14g1058 2229 Gene3D - 398 508 - -
Lele14g1058 2229 ProSiteProfiles Zinc finger PHD-type profile. 70 121 IPR019787 -
Lele14g1058 2229 MobiDBLite consensus disorder prediction 1887 1923 - -
Lele14g1058 2229 SUPERFAMILY Bromodomain 1110 1229 IPR036427 GO:0005515
Lele14g1058 2229 MobiDBLite consensus disorder prediction 1 20 - -
Lele14g1058 2229 MobiDBLite consensus disorder prediction 223 244 - -
Lele14g1058 2229 CDD Bromodomain 1121 1228 - -
Lele14g1058 2229 SUPERFAMILY DNA-binding domain 255 308 IPR016177 GO:0003677
Lele14g1058 2229 MobiDBLite consensus disorder prediction 2209 2229 - -
Lele14g1058 2229 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 253 320 IPR001739 GO:0003677
Lele14g1058 2229 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 66 137 IPR013083 -
Lele14g1058 2229 PANTHER OS02G0192300 PROTEIN 15 2225 - -
Lele14g1058 2229 SUPERFAMILY FYVE/PHD zinc finger 71 130 IPR011011 -
Lele14g1058 2229 MobiDBLite consensus disorder prediction 1908 1923 - -
Lele14g1058 2229 ProSiteProfiles Zinc finger PHD-type profile. 1273 1323 IPR019787 -
Lele14g1058 2229 Pfam Methyl-CpG binding domain 254 305 IPR001739 GO:0003677
Lele14g1058 2229 Gene3D - 1102 1230 IPR036427 GO:0005515
Lele14g1058 2229 ProSiteProfiles FYR domain FYRN motif profile. 397 450 IPR003888 GO:0005634
Lele14g1058 2229 Pfam Bromodomain 1164 1219 IPR001487 GO:0005515
Lele14g1058 2229 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1231 1333 IPR013083 -
Lele14g1058 2229 ProSiteProfiles Bromodomain profile. 1166 1214 IPR001487 GO:0005515
Lele14g1058 2229 Pfam PHD-finger 1275 1321 IPR019787 -
Lele14g1058 2229 Pfam PHD-finger 73 120 IPR019787 -
Lele14g1058 2229 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 1355 1399 IPR028942 -
Lele14g1058 2229 CDD PHD_SF 72 118 - -
Lele14g1058 2229 MobiDBLite consensus disorder prediction 1496 1518 - -
Lele14g1058 2229 CDD PHD1_Lid2p_like 1275 1320 - -
Lele14g1058 2229 SMART PHD_3 72 119 IPR001965 -
Lele14g1058 2229 SMART PHD_3 1275 1321 IPR001965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1058 Lele-ChrLele14 20547759 20558947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1058 2 2229 C2H2 Transcription Factor Family AT3G01460 45.399 0.0 1756
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Lele14g1058 Bromodomain 4.7e-05 No_clan