Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1057 ATGGGATTCGTTATATCGGTGCTAGCGCTATTTGTGGGGTTAGGGGTCTTGATCCTAATTCATATATGTTTAATTGTGAGGGAATCCAGAAGAGGAGACAGAGGCACAACGACGGAGAGTGAAACCACCACCGAGGAAGCAAGAAGCATGTCGAAAGATGAAATAGAGAAGCTTCCTTGTTATAACTATGTAGCCAAAGACAATGAAACTAGTACTGTAGAATGTGCGGTGTGCTTGGAGAATCTGGTTACAGGGGACAAGTGCAGATTATTGCATACATGCAAGCACAGTTTTCATGCCCACTGTTTGGATCAATGGCTTCTTCAGACACCCATTTGCCCTATTTGCAGGGCCAGTGTTGACTCTCAGGTGGAATACTTTGCTACTATAGATATAAATCACAATAACCATTTTGAGCCAAACAGTAGACATTTGAGAGAACGCCCAGAAACTGGTTTTACAATGCAGTCCACAGCAGAGAATTCAACGCCAGAAGGGTAG 501 0.4351 MGFVISVLALFVGLGVLILIHICLIVRESRRGDRGTTTESETTTEEARSMSKDEIEKLPCYNYVAKDNETSTVECAVCLENLVTGDKCRLLHTCKHSFHAHCLDQWLLQTPICPICRASVDSQVEYFATIDINHNNHFEPNSRHLRERPETGFTMQSTAENSTPEG 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1057 166 Pfam Ring finger domain 74 117 IPR001841 -
Lele14g1057 166 SUPERFAMILY RING/U-box 54 125 - -
Lele14g1057 166 SMART ring_2 75 116 IPR001841 -
Lele14g1057 166 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 4 134 - -
Lele14g1057 166 MobiDBLite consensus disorder prediction 151 166 - -
Lele14g1057 166 ProSiteProfiles Zinc finger RING-type profile. 75 117 IPR001841 -
Lele14g1057 166 MobiDBLite consensus disorder prediction 139 166 - -
Lele14g1057 166 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 49 126 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1057 Lele-ChrLele14 20543803 20544303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1057 46 120 C3H Transcription Factor Family AT1G74410 41.333 2.79e-17 74.3