Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1017 ATGACTGGTGATGGGGTTAATGATGCCCCAGCTCTTAAGAAAGCAGATATTGTAATAGTTGTTGCTGATGCCACTGATGCAGCTTGCAGTGCTTCTGACATTGTTCTCACAGAACCAGGTTTGAGTGTAATCATTAGTGCTGTCTTGACCAGTCGAGCAATATTCCAGAGGATGAAGAATTACACTATCTATGCAGTCTCCAACACAATCCGTATTGTGCTTGGTTTCATGTTACTGGCCCGTATATGGCAATTTGATTTCCCACCATTCAGGCACCATTATGACAATATCGAAGGACAGGCTTTTGTTGTTGCTCAGCTGATAGCTACACTGATTGCTGTGGCTTGGGATCTTGTTATTGAGAGAAAGATTGCATTTACAAGGAAGAAGGATTTTGGAAAGGAAGAACGTGAACTTAGATGGGCACATGCACAGAGTACCCCCCATGGACTTCACCCACCTGATACAAAGATGTTCAGTGAGTGTACGGGTCATGCAGAACTCAATCAGATGGCTGAAGAAGCTAAGAGAAGAGCTGAGATTGCTAGACTTAAGAGAGCTCCGGACATTGAAAGGCCACGTAGAGTCGGTGTTTAG 597 0.4422 MTGDGVNDAPALKKADIVIVVADATDAACSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSNTIRIVLGFMLLARIWQFDFPPFRHHYDNIEGQAFVVAQLIATLIAVAWDLVIERKIAFTRKKDFGKEERELRWAHAQSTPHGLHPPDTKMFSECTGHAELNQMAEEAKRRAEIARLKRAPDIERPRRVGV 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1017 198 PRINTS H+-transporting ATPase (proton pump) signature 2 18 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele14g1017 198 PRINTS H+-transporting ATPase (proton pump) signature 33 58 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele14g1017 198 Coils Coil 165 185 - -
Lele14g1017 198 Gene3D - 163 191 - -
Lele14g1017 198 Gene3D - 1 39 IPR023214 -
Lele14g1017 198 PRINTS P-type cation-transporting ATPase superfamily signature 25 37 - -
Lele14g1017 198 PRINTS P-type cation-transporting ATPase superfamily signature 2 21 - -
Lele14g1017 198 SUPERFAMILY HAD-like 1 82 IPR036412 -
Lele14g1017 198 Gene3D - 40 90 - -
Lele14g1017 198 PANTHER CALCIUM-TRANSPORTING ATPASE 108 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1017 Lele-ChrLele14 20301435 20303118 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1017 1 90 Primary Pumps ATPases AT3G47950 94.444 1.27e-48 167