Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1012 ATGCTGAGAACCAGACAAGGGTGGTTCCATATGGTGAACAACAACAACCATACCTGGATTATGTACGCCATCGGAGGAAAGGTGAATCCGACGCTTAGCCAAGGGAACCGATTCAGGGCTCCGAACAAGGACGCAGCGAAGCAGGTTTCAAGCAGAGTAAGTGCGAAGCCAGAGGGATGGCAAAACTGGCAGTGGGAGTCGCAACTTGACGAGTTTGTGAACGGAGCTGATTTTATAGGATCGGGGAAACCTATAATACCTCATCCCGACATGAACGAGGCTTTGATTCCACCCAGACATGGGCGTGAAGCCCCCGATATTGCGGTCTTTTCAGGTCAGATCAAGTGCAAGCCCGGCAGCCCTTGTTAG 369 0.5176 MLRTRQGWFHMVNNNNHTWIMYAIGGKVNPTLSQGNRFRAPNKDAAKQVSSRVSAKPEGWQNWQWESQLDEFVNGADFIGSGKPIIPHPDMNEALIPPRHGREAPDIAVFSGQIKCKPGSPC 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1012 122 PANTHER PECTATE LYASE 18-RELATED 2 120 IPR045032 GO:0030570
Lele14g1012 122 SUPERFAMILY Pectin lyase-like 2 98 IPR011050 -
Lele14g1012 122 Gene3D - 1 115 IPR012334 -
Lele14g1012 122 PRINTS Pollen allergen Amb family signature 63 87 IPR018082 -
Lele14g1012 122 PRINTS Pollen allergen Amb family signature 93 116 IPR018082 -
Lele14g1012 122 PRINTS Pollen allergen Amb family signature 22 41 IPR018082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1012 Lele-ChrLele14 20286039 20286407 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1012 1 122 Polysaccharide Lyase AT3G24230 42.276 2.41e-26 99.8