Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1005 ATGTCTGTTGGTCCTCGTCAGACTGGAGAGAAGAGAACAATTTCCATTTTCCTTGAGGAAGATTGCTGTGTTCAAGAGGTTAGCAACTGCAATCCTTTGCATCTTCTATTTCGACCATCATATCAGAATGTTTCTGAGGGTGTGCATTTAGATATGGATCGTATCTTGTATCAACAGTGTTGTATAAGTATTCATGATAATAAGAATGATGAACTCAAGTCTTCTAAAGAAGAGATAGGTGGGGTGGAAGAAGAAAATGAAGAAAGGTTGAAGATGATGCTGAACCGAGTGGAAAAGGATTACCAGTCCCTGCAGCTGCGTTTATTTGATATCTTGCCCAGAGAAGCTTCAGAAGAAAGCATAGCAGATTCAGCTAATACCCCTGATGAAACTGAAGAGCCTGAGCTCGCGACACTTTGCCTGGGAAGGAGTCCAAGTGACCCTAAAAAGGATACAAGAATCGGAAACACCACTAAACCTAAAGAAAGTGAAGATATGAAGGCTTGCCTTACCCTTGGATTAGACTCCAATTGTGAGTTATCAATGGAGATGGCGTCTGATCAGAGCCCAGGAAACAACTCAGGAGAAACAAAGGAAGCAGAAATAGGGGGAACTTGGCAATCAAATAAATCTGTCAAGGCCAAAAATGGAGAAGATGAAATTTCAGAGCAGATACCTGCTAAGAAAGCGAGGGTTTCTGTGAGAGCAAGATGTGACACCCCTACGATAAGTGATGGGTGCCAGTGGAGAAAATATGGACAGAAGATAGCCAAAGGGAATCCTTGTCCACGTGCATACTATCGCTGCACGTTTGCACCAGCATGTCCAGTCAGAAAACAGGTGCAAAGATGCGCTGAGGACATGTCCATCCTAATCACTACATATGAAGGGACCCACAACCACCCACTTCCAGTTTCAGCCACAGCCATGGCTTCCACCACTTCAGCTGCAGTTTCCATGCTATTGTCGGGTTCTTCAACATCTCAGCCTACAGATAACAGTTTTGCTTTTGCATCATTTGCAAATGCTCCTAAACTTCTTAATGCCCCAAACCTTGGACATTTTGATGTATCAAAAGCAAAACAGGTCTTCTTGCCCAACCCTGCCTCACCTCTGTTCCCAACAATCACTCTAGACTTAACTTCTGCTTCATCCTCATCAACCCATATCAATAATCGTCCCCCTTCAAACTTTACTTTAAACCCCAGATTTCCTGCAACAAGTCTAAGTTTTTGCTCAAAGGAGCCCAACATTCAACAAGCAGTATGGGGTAATGGAATCCTTAATAATGAGAAAACCCACATGAGGTCAGTTGACCTGGGAAATCAATTTCAGCAACAGTTCCATCAAAACTGCGTGCAAAACCAAGCTCCTTCACGAGAGGCTTTAGCAGAAACCTTAACCAAAGCAATCCATACGGATCCAAGACTTCGATCGGTGATAGCTGCAGCAGTTTCATCTATACTGGGTCAAGGATCTGCCAATGTGAACCAGCCAGGGGGAGGGGAAATTTCGGAGTTAGGGTTGAACTTGAAACTAGGACAACATTCTCAGTTTGCTTCTTCCAATCCGTTGACCCAAAATGGGAAAGGATGCTTACCATGTTACTCCAACAGATTGTCATCAAATTCCTTTACTGGAAACTTCATGCCTCTCCAACCTCCAGTTCCGTTTTCTGTATCTAAGAGAAGCGTGACTCCTACCACTAGTGATCAGATCAATCATTAA 1728 0.4352 MSVGPRQTGEKRTISIFLEEDCCVQEVSNCNPLHLLFRPSYQNVSEGVHLDMDRILYQQCCISIHDNKNDELKSSKEEIGGVEEENEERLKMMLNRVEKDYQSLQLRLFDILPREASEESIADSANTPDETEEPELATLCLGRSPSDPKKDTRIGNTTKPKESEDMKACLTLGLDSNCELSMEMASDQSPGNNSGETKEAEIGGTWQSNKSVKAKNGEDEISEQIPAKKARVSVRARCDTPTISDGCQWRKYGQKIAKGNPCPRAYYRCTFAPACPVRKQVQRCAEDMSILITTYEGTHNHPLPVSATAMASTTSAAVSMLLSGSSTSQPTDNSFAFASFANAPKLLNAPNLGHFDVSKAKQVFLPNPASPLFPTITLDLTSASSSSTHINNRPPSNFTLNPRFPATSLSFCSKEPNIQQAVWGNGILNNEKTHMRSVDLGNQFQQQFHQNCVQNQAPSREALAETLTKAIHTDPRLRSVIAAAVSSILGQGSANVNQPGGGEISELGLNLKLGQHSQFASSNPLTQNGKGCLPCYSNRLSSNSFTGNFMPLQPPVPFSVSKRSVTPTTSDQINH 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1005 575 MobiDBLite consensus disorder prediction 184 212 - -
Lele14g1005 575 ProSiteProfiles WRKY domain profile. 238 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele14g1005 575 FunFam probable WRKY transcription factor 31 228 305 - -
Lele14g1005 575 Coils Coil 87 107 - -
Lele14g1005 575 SUPERFAMILY WRKY DNA-binding domain 236 304 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele14g1005 575 SMART WRKY_cls 243 303 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele14g1005 575 MobiDBLite consensus disorder prediction 139 165 - -
Lele14g1005 575 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 66 496 IPR044810 GO:0003700
Lele14g1005 575 MobiDBLite consensus disorder prediction 146 165 - -
Lele14g1005 575 Coils Coil 65 85 - -
Lele14g1005 575 MobiDBLite consensus disorder prediction 184 219 - -
Lele14g1005 575 Gene3D WRKY domain 227 305 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele14g1005 575 Pfam WRKY DNA -binding domain 245 302 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1005 Lele-ChrLele14 20237019 20239434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1005 82 548 WRKY Transcription Factor Family AT5G15130 41.036 1.37e-79 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele14g1005 WRKY 4e-24 CL0274