Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0988 ATGGACTTAACCCCCACAATCGCCAACAACAACACCGCCACCAATACTCCTACTAGCACAAAATCCCCAGAACATGACATTGAAACGCCGACCAGGATCCAGACCGCCGCCAAGCCTTTGTCCTCCTCCAACGGCGTCCTCAAGCGCCACCACCACCACCGCCTCCCCAGCCAGCCACTGCCCGTCACGTACAAGGAATGCCTGAAAAACCATGCAGCCAGCTTAGGAGGCCACGCCCTGGACGGTTGTGGCGAGTTCATGGCCTCTCCCACGGCCAACCCCGCCGACCCCAGCTCCATCAAATGCGCCGCCTGTGGCTGCCACCGCAATTTCCACCGCCGTGAGCCAGAAGAGCCTATCTCTACAACGCACGTCATCGAGTACCAGTCTCACCATCGACACCATCCCCCGCCGCCTCCGCCTTTTCACGTTTCCAATCGAAGCCCCAATTCGGCGTCGCCACCTCCGATCTCCTCTTCGTACTACCCTTCCGCACCCCATATGCTTCTGGCTCTCTCTGCGGCCGGTATACAAGCTCCTCCGGAGAGTGCGGCTGTTCCCGCAAGTGCTCTTGCAACGCCGAGCCCGAATGCGCGCAAGCGGTTCAGGACCAAGTTCACCCAGGATCAGAAGGAGAAGATGTACCATTTCGCGGAGAGGGTGGGGTGGAAGATGCAGAAGAGGGACGAAGAATCGGTTCAAGAGTTCTGCAATGAGGTTGGGGTTGACAGGGGAGTGTTGAAGGTTTGGATGCACAACAACAAGAACACCTTCGGCAAGAGAGATGCTGGTAATAATCATGATGGTAGGAACACTTTAGAGCAAGACCCTCACGTTCTTCTCCCCGCTGAAATCCACGCCAACAACGACAACGGCAGCGCGCAGGATCCGAATCACCACCTCTACACCAACGATAATAGTGGGGCAAACCTCGGTACTAATGGGTTCTCTTCGTCCTCTTGA 963 0.5691 MDLTPTIANNNTATNTPTSTKSPEHDIETPTRIQTAAKPLSSSNGVLKRHHHHRLPSQPLPVTYKECLKNHAASLGGHALDGCGEFMASPTANPADPSSIKCAACGCHRNFHRREPEEPISTTHVIEYQSHHRHHPPPPPPFHVSNRSPNSASPPPISSSYYPSAPHMLLALSAAGIQAPPESAAVPASALATPSPNARKRFRTKFTQDQKEKMYHFAERVGWKMQKRDEESVQEFCNEVGVDRGVLKVWMHNNKNTFGKRDAGNNHDGRNTLEQDPHVLLPAEIHANNDNGSAQDPNHHLYTNDNSGANLGTNGFSSSS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0988 320 Gene3D - 189 259 - -
Lele14g0988 320 MobiDBLite consensus disorder prediction 1 30 - -
Lele14g0988 320 MobiDBLite consensus disorder prediction 288 320 - -
Lele14g0988 320 FunFam Zinc-finger homeodomain protein 2 188 260 - -
Lele14g0988 320 MobiDBLite consensus disorder prediction 1 24 - -
Lele14g0988 320 MobiDBLite consensus disorder prediction 287 320 - -
Lele14g0988 320 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 64 115 IPR006456 -
Lele14g0988 320 SUPERFAMILY Homeodomain-like 194 260 IPR009057 -
Lele14g0988 320 MobiDBLite consensus disorder prediction 127 159 - -
Lele14g0988 320 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 42 257 - -
Lele14g0988 320 Pfam ZF-HD protein dimerisation region 62 116 IPR006456 -
Lele14g0988 320 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 199 256 IPR006455 -
Lele14g0988 320 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 63 115 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0988 Lele-ChrLele14 20127059 20128021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0988 12 255 ZF-HD Transcription Factor Family AT5G15210 53.815 3.84e-75 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Lele14g0988 ZF-HD_dimer 1.4e-28 No_clan