Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0983 ATGACAGGAAGCAGTGCTGCGTCTTTTACGCTGCGTCTGTTATTGCATCCTATAAAGAAGCTTGGAACAAACTCTCCTTCTGGAACAGATGCTCAAGCTCTAGTCATGGAGATCGTCATCACTTTCGTTCTCATGTTCGTTATCTGCGCCGTCACAACTGATTCAAAAGCTGTGAGAACGATATCGGGGGGATCGTTGAATCCAGCGAGAACATTGAGTCCTGCATTTGCAAGGGCATGGTCTTACAGTACTGTCCAGGATAATGATGATGATGACTCAGCTTCCTCCATTAAACTAACTTCGCGTCTATCCAAGCTACGCTCCATGAATAAGGAAGCTGATCAAGTTGGTGGGAAGACGATCCACACGACAAGTCCAAATATGTGGAGCTTGAATCCTGAGAGAGATCAGCCGCCCAACCCAAGCATCCATAAACGACCTGCTGTTCCTCTTCCCTTCGCAAAACTCGCAGAGAATTACCCTCCTGGTTTTCTCAGAAAGGTATTGGCAGAGATAATAGGAACATATCTGTTGGTGTTTGTGGGAAGTGGGGCGGCTGCTCTGAATGCTTTTGATGAGCAGAAAATATCAAAACTAGGATCTTCACTTGCAGGAGGATTCATTGTGATTGTGATGATTTATGCTATCGGACACGTCTCTGGTGCTCACATGAACCCAGCAGTGTCCTTAGCTTTTGCCGCCGTCAGCCATTTTCCATGGAAACAGGTCCCATTATACGTGGCAGCCCAATTGACAGGAGCCATTTCTGCCTCATTTACGTTGCGGCTGATATTGGACCCCATAAGACAGCTTGGGACAACCTCACCTTCTGGAAGTGATGTTCAAGCTCTCATCATGGAGATGGTAGCAACGTTCACTATGATGTTCATCGCCTCCGCCGTGTCAACTGATGCAAAAGCTGTAAAATCGCCTTACATTCATCCAAATCATGCCGCTTTCAAAACATTTTACGTTAGCGAGCTCGCAGGAGTTGCAGTAGGCTCGTCAGTAATCATAGCAGGTATCCTTGCAGGACCTATATCAGGGGGATCGATGAACCCAGCAAGAACACTTGGTCCTGCAATAGCAAGTGGGTCCTATAAAGGACTTTGGGTCTATGTGGTTGGACCAGTTACTGGGGCACTTTTAGGAGCATGGTCTTACATTACTATTAAAGAGACAGATGACTCAGATTCCGCCACTTCAGCGCTATTATTTCCACTCGAGCTTAGCTCAAAGAATAGGGAAACTGAACAAGTTTAA 1263 0.4632 MTGSSAASFTLRLLLHPIKKLGTNSPSGTDAQALVMEIVITFVLMFVICAVTTDSKAVRTISGGSLNPARTLSPAFARAWSYSTVQDNDDDDSASSIKLTSRLSKLRSMNKEADQVGGKTIHTTSPNMWSLNPERDQPPNPSIHKRPAVPLPFAKLAENYPPGFLRKVLAEIIGTYLLVFVGSGAAALNAFDEQKISKLGSSLAGGFIVIVMIYAIGHVSGAHMNPAVSLAFAAVSHFPWKQVPLYVAAQLTGAISASFTLRLILDPIRQLGTTSPSGSDVQALIMEMVATFTMMFIASAVSTDAKAVKSPYIHPNHAAFKTFYVSELAGVAVGSSVIIAGILAGPISGGSMNPARTLGPAIASGSYKGLWVYVVGPVTGALLGAWSYITIKETDDSDSATSALLFPLELSSKNRETEQV 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0983 420 SUPERFAMILY Aquaporin-like 160 393 IPR023271 -
Lele14g0983 420 PRINTS Major intrinsic protein family signature 166 185 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele14g0983 420 PRINTS Major intrinsic protein family signature 286 304 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele14g0983 420 PRINTS Major intrinsic protein family signature 205 229 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele14g0983 420 PRINTS Major intrinsic protein family signature 371 391 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele14g0983 420 PRINTS Major intrinsic protein family signature 242 261 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele14g0983 420 PRINTS Major intrinsic protein family signature 334 356 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele14g0983 420 SUPERFAMILY Aquaporin-like 2 78 IPR023271 -
Lele14g0983 420 MobiDBLite consensus disorder prediction 117 137 - -
Lele14g0983 420 Pfam Major intrinsic protein 164 388 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele14g0983 420 PANTHER AQUAPORIN NIP2-1 1 79 IPR034294 -
Lele14g0983 420 ProSitePatterns MIP family signature. 223 231 IPR022357 -
Lele14g0983 420 MobiDBLite consensus disorder prediction 114 139 - -
Lele14g0983 420 Gene3D Glycerol uptake facilitator protein. 142 401 IPR023271 -
Lele14g0983 420 CDD MIP 166 388 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele14g0983 420 Gene3D Glycerol uptake facilitator protein. 1 88 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0983 Lele-ChrLele14 20095873 20099495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0983 1 75 Major Intrinsic Protein MIP AT5G37820 43.750 1.26e-11 63.5