Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0978 ATGGCGGCCATGCCCACCGTCGTGATCAACGACGACGATTCGGAGTGTGCGATTTGCTTGGTAGATTACATGATTGGTGACGAGACTAGGGAGATGCCCTGCAAGCAAAGGTTTCACCCTTTCTGCATTGAGAAGCGGTTGGGGATACATGGCGTGTGTCCTGTTTGCCGATACCGGATGCCCGTGGACGATAGGGATGTGGTCGCGGTGGTGAAAGGACGGAGAGTGCTGGTGGCCTCATGCCTGCAGGTTCCGACCCATCCTGGAGCTCCGCGCATTCTGATCCTGCTTCTGATTCGCAAGATGAGAGTTCTACAGTGGATGAATCCTCGACGAATCCAGAGTCAGTAG 351 0.5499 MAAMPTVVINDDDSECAICLVDYMIGDETREMPCKQRFHPFCIEKRLGIHGVCPVCRYRMPVDDRDVVAVVKGRRVLVASCLQVPTHPGAPRILILLLIRKMRVLQWMNPRRIQSQ 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0978 116 Pfam Ring finger domain 15 57 IPR001841 -
Lele14g0978 116 ProSiteProfiles Zinc finger RING-type profile. 16 57 IPR001841 -
Lele14g0978 116 SUPERFAMILY RING/U-box 10 63 - -
Lele14g0978 116 PANTHER SI:CH211-59O9.10 5 58 - -
Lele14g0978 116 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 6 73 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0978 Lele-ChrLele14 20065643 20065993 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0978 3 67 C3H Transcription Factor Family AT1G26800 55.385 5.32e-21 81.6