Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0976 ATGTCGGAAGCAAAAGACCCCGCGATCAAGCTCTTCGGGAAGACGATCCCGCTGCCGGAGATCCCCACCGGATCTGGAGGCTCGGCCGGAGCTCTAGCTTCTTCTTCTGGGGATATTGCTGATGATGGTATTGATCACAATTGTGCTTCTCCCACCCACTCATCGAGAGAGTCCAACACGAAGAGGGACGAGGAAAAGCAAGAAACCGAGAAGGACACTTTGGGAGAGAATCCAGATGAGAATATGGAGGATGGATCCCCCACTCAATCTACAGAAGAGGTCACTAATCCAGATGCAGCCTCAAGGATGGGTGAAGAATCAGTTACACCCCCTACTGCGAAGGACGCTACTACCTTAAAGGCTTCAAAATCTGAAGAGCAGAGCGAGACAAGCAATTCACAAGAGAAGAGTTTGAAAAAGCCGGACAAAATACTGCCTTGCCCCCGCTGCAATAGCATGGACACCAAGTTCTGCTACTACAATAATTACAATGTCAACCAACCCCGGCACTTCTGCAAGAACTGCCAGCGATACTGGACTGCCGGTGGAACTATGAGGAATGTGCCTGTGGGTGCTGGTCGTCGAAAGAACAAAAATTCTTCTCACTATCGCCAGATAACTGTCACTGAAGCACTCCAGACTGCTCGAACAGACATTCCAAATGGAGTACATCATCCTGCCCTGAAGCCCAATGGCACAGTCCTTGCCTTTGGGTCTGACACACCTTTGTGTGAGTCAATGGCATCCGTCTTGAACCTTGCTGATACAACAATGCAGGACTCCACAAGAAATGGATTTCATAGGCCTGAAGAACTAAGAATTCCTATTCCCCATGCCAGTGGAGAGAAAGAAGATGATCATTCCAATAAATCTCCCATGATGTCAACGAAGCCGATGGATGATACAAGCATCAACAGGCAACAAGAACAAGCAATGCAGAACTGTCAGAGTTTCCCACCTCAGGTTCCTTACTATCCTGGGGCACCTTGGCCTTTCCCATGGAATCCAGTGCAGTGGAGCTCTCCAGTACCACCGCCCACGTTTTGCCCTCCAGGATTTACCATGCCATTCTATCCTGCAGCTGCATATTGGGGTTGTACTGTCTCAGGTGCTTGGAACATACCATGGCTACAGCAACCATCACCACCGAACAGCGCTGGCCCCAACTCGCCAACTCTGGGTAAACATTCGAGAGAAGAAAACATGCTCAAGATAAATGACTCAGGGGGAGATAATGAACGTGGCAAAGAAAATGGAAAAGAGAAGTGCCTTTGGGTTCCTAAAACTTTGAGGATCGATGACCTGGGAGAAGCAGCTAAAAGCTCTATATGGACAACACTTGGGATTAAGAATGATAAGGCTGAGTCAGTTCAAGAGGGAGGACTCTTTAGGGCATTCCCATCAAAGGGCGACGGAAAAGATCATTCAACACAAAACTCAACAGTTTTGCAGGCCAATCCGGCGGCGTTGTCTAGTTACAAATGCCAGGCAACTAGTGCTCACCAACCTTGTTTGGAAGAGTACTTTCTTGTCGACATTAGGCAGCCTGCTTCTGTTTATATTGTACAGACTTGGCAGCAAGAATTTCAGAAATTCTTGAATGCACTCGAGTTTCAAAGTACGTTGAAGACAATGAGCGTATTTAAGAGAATTTTTGAAAGATTTCAGATAGATTGTACGAGAGATCTGTGCTGTTGTAGGATTTGCGGATATAGCTTTCTCTCACTCTCTTCAAATTTCAAAACCCTGCGTTCTCCTTCCCCTCCGGCCGATTCGTTTACATTGGCCTCTTTCTTCTTCCAAAAACTTAATGATGAGCCCCTCACGTTTCCTCGCTCTTCTTCTGCTCACGTCTCTGCTCTCTCTCTCCTTCACCTCCGGTATCTATCTCCTACTTGCCTTCATTCGTTTCGTCAATTCCTTGTTGTGACTGTGACAACACTTGTCGTTTCTGTGAATGTTTTAAGGTTTCGGGAGATCGCTGAAGGAGACGCTTCCTCGCCATCATTATACGGCAAAGCCAGACACTACAGAGGAACATTCTGGAAGATTGAGGGTGATGGCACAAATGATGGATTATGGCGACCCAGAGGCAAACACTAA 2103 0.4727 MSEAKDPAIKLFGKTIPLPEIPTGSGGSAGALASSSGDIADDGIDHNCASPTHSSRESNTKRDEEKQETEKDTLGENPDENMEDGSPTQSTEEVTNPDAASRMGEESVTPPTAKDATTLKASKSEEQSETSNSQEKSLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSSHYRQITVTEALQTARTDIPNGVHHPALKPNGTVLAFGSDTPLCESMASVLNLADTTMQDSTRNGFHRPEELRIPIPHASGEKEDDHSNKSPMMSTKPMDDTSINRQQEQAMQNCQSFPPQVPYYPGAPWPFPWNPVQWSSPVPPPTFCPPGFTMPFYPAAAYWGCTVSGAWNIPWLQQPSPPNSAGPNSPTLGKHSREENMLKINDSGGDNERGKENGKEKCLWVPKTLRIDDLGEAAKSSIWTTLGIKNDKAESVQEGGLFRAFPSKGDGKDHSTQNSTVLQANPAALSSYKCQATSAHQPCLEEYFLVDIRQPASVYIVQTWQQEFQKFLNALEFQSTLKTMSVFKRIFERFQIDCTRDLCCCRICGYSFLSLSSNFKTLRSPSPPADSFTLASFFFQKLNDEPLTFPRSSSAHVSALSLLHLRYLSPTCLHSFRQFLVVTVTTLVVSVNVLRFREIAEGDASSPSLYGKARHYRGTFWKIEGDGTNDGLWRPRGKH 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0976 700 MobiDBLite consensus disorder prediction 261 303 - -
Lele14g0976 700 MobiDBLite consensus disorder prediction 82 97 - -
Lele14g0976 700 MobiDBLite consensus disorder prediction 129 143 - -
Lele14g0976 700 PANTHER CYCLIC DOF FACTOR 2 1 494 IPR045174 GO:0003700|GO:0006355
Lele14g0976 700 ProSiteProfiles Zinc finger Dof-type profile. 145 199 IPR003851 GO:0003677|GO:0006355
Lele14g0976 700 MobiDBLite consensus disorder prediction 264 291 - -
Lele14g0976 700 MobiDBLite consensus disorder prediction 13 145 - -
Lele14g0976 700 ProSitePatterns Zinc finger Dof-type signature. 147 183 IPR003851 GO:0003677|GO:0006355
Lele14g0976 700 MobiDBLite consensus disorder prediction 111 128 - -
Lele14g0976 700 Pfam Dof domain, zinc finger 142 199 IPR003851 GO:0003677|GO:0006355
Lele14g0976 700 MobiDBLite consensus disorder prediction 56 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0976 Lele-ChrLele14 20047892 20054090 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0976 6 491 C2C2-Dof Transcription Factor Family AT5G39660 43.629 1.93e-105 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele14g0976 zf-Dof 4.9e-32 No_clan