Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0969 ATGGGTCGGTCACCATGCTGCGACAAGGTGGGCTTAAAGAAAGGGCCATGGACTCCTGAGGAAGATCAGAAATTGTTAGCTTATATCGAAGAACACGGCCATGGAAGCTGGCGTGCCTTGCCAGCAAAAGCTGGACTTCAGAGGTGTGGCAAGAGCTGCAGACTGAGATGGACCAATTATCTTAGGCCTGATATAAAGAGAGGAAAGTTCAGCTTGCAAGAAGAGCAAACCATCATTCAACTTCATGCCCTCTTGGGGAACAGGTGGTCGGCTATAGCAACACACTTGCCAAAGAGAACAGATAATGAGATCAAGAACTACTGGAACACGCATCTTAAGAAAAGGCTAGCCAAAATGGGGATCGACCCAGTGACCCACAAGCCCAAGAACGATGCCCTTCTTTCCATTAACGGCCAATCCAAGAGTGCTGCCAACCTTAGTCACATGGCTCAATGGGAGAGTGCTAGGCTTGAAGCTGAAGCAAGGTTGGCTAGAGAATCAAAACTACGTTCACATTCATTGCAGCATCATCAGCTTTGCAGCTCTGGGTTTTCATCTTCATCTTCTGCTGCTTCAACTTCATCAGCCCCAGTTGCGAATAATAAACCAGAGGGACCACCACCTATTTCCTCACGCTCTCTAGATGTGCTTAAGGCATGGAATAATGGAGGTTGGTTGAAATCTGCTCATGGAGGCCATAATGTTGGCGGCGGTGGAGGCGGAGACCTTGAATCCCCTTCGTCTTCCCTGACTTTCTCCGAGAACGCGCCGCCGATTATGACCAGTGGACTTGGAGAAAGTACAATGCCCACGATTGAGTTCGTGGGCTCGTCTGGTTCTTCCCAGACAGGAATTGTGAAAGAGGAAGGTGAACAAGAATGGAAAGGTTATGAGAGTTCAGTGCATCTTCCAGAATACAAAGATGGTATAGATCATAGCTCCATGTCTTTTGCTTCTAGCCTGCATGAGTTGACAATGTCCATGGAAGGCACGTGGACGTCTGAGTCTCTTAGGGCCAGTACTGATGCTATCGCTGAGGAAGGATTCACCAATCTGTTGCTTAATACTAGCTCCGATGGCCGGAGTTTGTCGGAGGAAGGCGGAGGAGAGTCTAATAACTGTGAAGGTAATGGAGGCAGTACTGGGAGTGACCTTTATGAAGATAACAAGAACTACTGGAACAGCATTCTTAATCTAGTCAACTCTTCTCCTTCTGACTCTCCCATGTTCTGA 1233 0.4793 MGRSPCCDKVGLKKGPWTPEEDQKLLAYIEEHGHGSWRALPAKAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHKPKNDALLSINGQSKSAANLSHMAQWESARLEAEARLARESKLRSHSLQHHQLCSSGFSSSSSAASTSSAPVANNKPEGPPPISSRSLDVLKAWNNGGWLKSAHGGHNVGGGGGGDLESPSSSLTFSENAPPIMTSGLGESTMPTIEFVGSSGSSQTGIVKEEGEQEWKGYESSVHLPEYKDGIDHSSMSFASSLHELTMSMEGTWTSESLRASTDAIAEEGFTNLLLNTSSDGRSLSEEGGGESNNCEGNGGSTGSDLYEDNKNYWNSILNLVNSSPSDSPMF 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0969 410 MobiDBLite consensus disorder prediction 180 213 - -
Lele14g0969 410 MobiDBLite consensus disorder prediction 244 262 - -
Lele14g0969 410 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele14g0969 410 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 194 - -
Lele14g0969 410 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Lele14g0969 410 Gene3D - 13 66 - -
Lele14g0969 410 MobiDBLite consensus disorder prediction 357 385 - -
Lele14g0969 410 FunFam MYB-related transcription factor 13 66 - -
Lele14g0969 410 FunFam MYB transcription factor 69 116 - -
Lele14g0969 410 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele14g0969 410 Gene3D - 69 116 - -
Lele14g0969 410 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele14g0969 410 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele14g0969 410 MobiDBLite consensus disorder prediction 231 262 - -
Lele14g0969 410 SMART sant 66 114 IPR001005 -
Lele14g0969 410 SMART sant 13 63 IPR001005 -
Lele14g0969 410 CDD SANT 16 61 IPR001005 -
Lele14g0969 410 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele14g0969 410 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Lele14g0969 410 MobiDBLite consensus disorder prediction 180 200 - -
Lele14g0969 410 CDD SANT 69 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0969 Lele-ChrLele14 20014180 20016131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0969 1 410 MYB Transcription Factor Family AT3G01140 52.844 1.35e-126 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele14g0969 Myb_DNA-binding 1.5e-15 CL0123