Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0963 ATGGCAGCTCGTGTAATAACGGTTTCACAGACCGGAAGCGGAGACTATCGGACGGTGCAGGAAGCAATTGATACCATTCCACTGGGAAACAACCGTCGGACGGTGATTCGAGTGTCTCCGGGAATCTACAAGCAGCCAGTTTACGTACCTAAGACTAAGAATTTCATCACCCTTGCTGGTCTGTGCCCGGAGGATACTGTGCTTACCTGGAATAATACCGCCACCAGAATCGAACACCACCAGGCTGCTCGGGTAATAGGCACTGGTACTTTTGGCTGTGGTAGTACCATTGTGGAGGGAGAGGATTTTATTGCCGAGAACATCACGTTCGAGAATTCCTCCCCTCAGGGTTCAGGGCAAGCAGTGGCAATTAGAGTGACAGCAGATCGATGTGCTTTCTATAACTGCAGGTTCCTGGGATGGCAGGATACTCTGTACTTACACTATGGCAAACAGTACTTGAAAGATTGTTATATTGAAGGAAGCGTGGACTTTATTTTTGGCAATAGCACTGCTCTTTTGGAACATTGCCATATTCACTGCAAGTCTGAAGGTTTCATAACTGCACAGAGCAGAAAATCTTCTCATGAAACAACTGGTTATGTATTCCTAAGATGTGTCATAACTGGTAATGGAGATACTTCCTACGCATATCTTGGACGACCATGGGGACCTTTTGGAAGAGTGATCTTTGCACACACTTATATGGATCGATGTATAAGGCCTCATGGCTGGAATAATTGGGATAAAGTCGAGAATGAGAGAACTTGTTGCTTTTATGAATACAGGTGTTATGGACATGTTTGCTGTCCATCCAAACGAGTAGCATGGGCGAGAGAATTGATAGATGAAGAAGCAGAACAGTTCCTTTCACATCGTTTCATTGACCCAGATGCTAATAGACCTTGGCTTGCCCAAAGAATGGCTTTGAGGATTCCATATTCTGCTTAG 951 0.4511 MAARVITVSQTGSGDYRTVQEAIDTIPLGNNRRTVIRVSPGIYKQPVYVPKTKNFITLAGLCPEDTVLTWNNTATRIEHHQAARVIGTGTFGCGSTIVEGEDFIAENITFENSSPQGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCKSEGFITAQSRKSSHETTGYVFLRCVITGNGDTSYAYLGRPWGPFGRVIFAHTYMDRCIRPHGWNNWDKVENERTCCFYEYRCYGHVCCPSKRVAWARELIDEEAEQFLSHRFIDPDANRPWLAQRMALRIPYSA 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0963 316 Gene3D - 1 310 IPR012334 -
Lele14g0963 316 Pfam Pectinesterase 6 296 IPR000070 GO:0030599|GO:0042545
Lele14g0963 316 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 3 303 - -
Lele14g0963 316 SUPERFAMILY Pectin lyase-like 2 303 IPR011050 -
Lele14g0963 316 ProSitePatterns Pectinesterase signature 2. 159 168 IPR033131 -
Lele14g0963 316 FunFam Pectinesterase 2 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0963 Lele-ChrLele14 19970045 19974206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0963 4 309 Carbohydrate Esterase AT5G47500 38.291 3.79e-69 218