Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0959 ATGGGTTGCATTAACTCCAAAAATGCGGTTGCCGGAGATTCACCTGTGCACAGGAAGGTGCCCACCGACAATGGGTCCGCTATTGTGGATCCTCCGTCCAAATCCCGAACGGGGATGTTAGCTTCTGCCGATAAATGGGATCAAAAATCGGAGGAGAGCAATCGAGATGGGAAGAAGTCCGGGAAGGATGGTTCCAAAGGAAGCGGGAATTTCAGTCTCAAGATGGGGATTTCGCATCGGTTCGTCGAAGCGGAGCTGAATGCGGCTGGATGGCCCCCTTGGCTCACAGCTGCTGCAGGTGAAGCTATTCATGGATGGGTGCCCCTCAGAGCAGATTCTTTTGAGAAATTAGAGAAGATTGGGCAAGGTACATATAGCAGTGTGTTCCGAGCACGTGAAGTTGAAACTGGGAGATTGTTTGCCCTGAAGAAGGTGCGGTTTGACAATATTCAGCCTGAGAGTGTGAGGTTCATGTCAAGAGAAATTACAATTCTTCGCAGGCTTGACCATCCAAACATTATGAAATTGGAGGGTGTAATTACATCCCGACTATCAAGTAGTTTATACCTTGTGTTTGAATATATGGAGCATGATCTTGCGGGACTAGTATCTTGTCCTGACATAACGTTCAGCGATTCACAGGTGAAATGTTACATGAGGCAACTACTGAGTGGACTTGAGCACTGTCACCTACGGGGTATCATGCATCGAGACATTAAAGTATCCAATATATTAGTAAATAATGATGGTATACTCAAGATGGGCGATTTTGGATTGGCGAATATAATTAGCCCCAGTAACAAGCATCCATTAACCAGTCGTGTAGTGACTCTATGGTACCGTCCTCCTGAACTCTTAATGGGATCGACTAACTATGGAGTATCAGTGGATCTATGGAGTGCGGGTTGTGTATTTGCAGAACTTTTTCTGGGCAAACCTATCCTCAAGGGGAGAACTGAGGTTGAACAATTGCACAAAATTTTTAAGCTTTGCGGTTCACCACCTGATGAATTCTGGAAAAAGGGCAAGCTTCCTCATGCAACAATGTTTAAACCTCAGATTACTTACGAAGGCTCTTTTTCTGAGAGGTTTCCAGATATTCCAGAAACTGCTCTAGACCTAATGAAGACTCTACTATCCATTGATCCCCATGAGCGTGGGACTGCCTCTTCTGCTCTGATGGCTGAGTATTTTAGCACCAAGCCGTTTGCTTGTGATCCATCAAGCATGCCAAAATATCCACCCAACAAAGAAATGGATGCTAAAAATCGGGAAGAAGTTCGCAGGAAAAAGGCTGAAGGTAAAGTGCATGAGGCGGCGACATCAAGAAAGCAAAGACGAGCCCGCAAAGTTTTACAAGAACCAAACAATTTCAATAACCCACCTTCAACTGATGAAAAGCAGAACATTTCTCAAAAAGCTGTTAAAGACGATGTTAAATCAAATCCTAACAAGGGAAAAAGAGGAGCCATGCAGAAGGCGCCATCAAAGCCTTCAATGGAAGCAATGTCAGAGACCTCCCAGATCAATGGCGTACCTCATGGCTTTAGTATATTAGAAGGACCAGTACCAGCCTCAGGTGCTAGTGGGTTTGCATGGGCAAAAAGAAGAAAACCAGAGGTTTCATCCACATTATCAGATGGTTCAAAAAGCAAAATTAGCGCACTAGATCCAAACTTTGCAAAAGGCACATATGATTTAAGCAGACATTTGATCGATGTCGCAGAAAAAAAATATAAGGACACTACAGGCCACCATGCTCACAATGGTCAATCGAAATATAGTGATGCATCTGATACATGTTCAAATTTAGCAACGATTTTTGATCCCACGGAAACACCAGATGGTGTGTTGAATACTCAGGTAAATTTGAAACCCTCAAGTTGCATCGATTTTCGATTCTTCATCCCAAATCCTATAAGTCTTCTTCTCTCCGTCTACGGTTTAATCGGCGATCTGAAAATGGATGGGTCAACTGGTCGTGGTGGTACTGGTGTGGACATGTATCTATCAAATTATAAATTGGGGAAAACACTTGGTATTGGATCCTTTGGCAAGGTGAAATTTGCTGAGCATGTTTTGACAGGTCACAAAGTTGCCATTAAGATCCTCAACAAACGTAAGATAAGGAACATGGAAATGGAAGAAAAAGTAAGAAGAGAAATCAAAATTTTAAGATTGTTCATGCATCCTCACATCATACGACTCTATGAAGTCATAGAAACCCCGGCAGACATATATGTTGTGATGGAGTATGTAAAATCTGGAGAGCTCTTTGACTACATAGTAGAAAAGGGTAGGTTGCAAGAAGATGAAGCTCGTAATTTTTTTCAGCAGATAATCTCTGGTGTGGAGTACTGTCACAGGAATATGGTGGCTCATAGAGACTTAAAGCCTGAGAACTTACTGCTGGACTCCAACTGCAATGTCAAGATTGCAGATTTTGGTCTGAGCAACGTCATGGTTGACGGCCATTTCCTTAAGACAAGTTGTGGGAGCCCAAACTATGCTGCTCCTGAGGTAATCTCCGGAAAATATTATGCTGGGCCTGAAGTGGATGTCTGGAGCTGTGGTGTAATTTTATACGCTCTTCTTTGTGGTACTCTTCCTTTTGATGATGAGAACGTTCCAAACCTTTTCAAAAAAATAAAGGGTGGGATATACGTTATTCCTAGTCATCTATCACTTGGTGCTAGAGATCTGATACCAAGGATGCTTGCGGTCGATCCTATGAAAAGGGTGACCATACCTAAGATCCGTCAACACCCATGGTTCCAAGCTCATCTCCCTCGATATTTGGCAGTGCCACCACCCGATACTTCACAACAAGCAAAAAGGATTGACGAGGAAATTCTTCAGGAAGTGATTAACAGGGGATTCGATAGGACTCAGTTGGTTGAATCTCTTCGCAACATGATACAGAATGAGGGTACTGTGGCATATTATTTGCTATTGGACAATCGATTCCGTGTTTCAAGGGGATATCTTGGTGATGAGTTTCAAGAGAGTATGGATGCTGGTTATAATCATATGCATCCTAATGAAGTGGCTGCTCCAGCTGTTGGGAACCGCTTTCCGGGGAATATGGATTATCAAGGAGCTGGATTGAGGCCACAGTTCCCTGCTGAGAGAAAATGGGCCCTTGGGCTTCAGTCTCGAGCCCATCCTCGTGAAATAATGACTGAGGTCCTTAAAGCTTTGCAAGAATTGAATGTGTGCTGGAAGAAGATTGGGCACTATACCATGAAGTGCCGGTGGGTTGCTGGCATTCTGGGTCATCATGAAGGAATGGTGAACAACCATGATCATTACTCTGGAGATGATTCTGCTGTTATTGAGAATGGTGCTATTTCTAAGTCAAATGTAGTCAAGTTTGAAATGCAGCTTTACAAAACCCGTGAAGAGAAGTATCTGCTTGATCTTCAAAGGGTCCAGGGCCCACAGTTTCTCTTCCTGGATCTTTGTGCCTCTTTCCTTGCGCAGCTACATGTCCTTTAG 3498 0.4354 MGCINSKNAVAGDSPVHRKVPTDNGSAIVDPPSKSRTGMLASADKWDQKSEESNRDGKKSGKDGSKGSGNFSLKMGISHRFVEAELNAAGWPPWLTAAAGEAIHGWVPLRADSFEKLEKIGQGTYSSVFRAREVETGRLFALKKVRFDNIQPESVRFMSREITILRRLDHPNIMKLEGVITSRLSSSLYLVFEYMEHDLAGLVSCPDITFSDSQVKCYMRQLLSGLEHCHLRGIMHRDIKVSNILVNNDGILKMGDFGLANIISPSNKHPLTSRVVTLWYRPPELLMGSTNYGVSVDLWSAGCVFAELFLGKPILKGRTEVEQLHKIFKLCGSPPDEFWKKGKLPHATMFKPQITYEGSFSERFPDIPETALDLMKTLLSIDPHERGTASSALMAEYFSTKPFACDPSSMPKYPPNKEMDAKNREEVRRKKAEGKVHEAATSRKQRRARKVLQEPNNFNNPPSTDEKQNISQKAVKDDVKSNPNKGKRGAMQKAPSKPSMEAMSETSQINGVPHGFSILEGPVPASGASGFAWAKRRKPEVSSTLSDGSKSKISALDPNFAKGTYDLSRHLIDVAEKKYKDTTGHHAHNGQSKYSDASDTCSNLATIFDPTETPDGVLNTQVNLKPSSCIDFRFFIPNPISLLLSVYGLIGDLKMDGSTGRGGTGVDMYLSNYKLGKTLGIGSFGKVKFAEHVLTGHKVAIKILNKRKIRNMEMEEKVRREIKILRLFMHPHIIRLYEVIETPADIYVVMEYVKSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVAHRDLKPENLLLDSNCNVKIADFGLSNVMVDGHFLKTSCGSPNYAAPEVISGKYYAGPEVDVWSCGVILYALLCGTLPFDDENVPNLFKKIKGGIYVIPSHLSLGARDLIPRMLAVDPMKRVTIPKIRQHPWFQAHLPRYLAVPPPDTSQQAKRIDEEILQEVINRGFDRTQLVESLRNMIQNEGTVAYYLLLDNRFRVSRGYLGDEFQESMDAGYNHMHPNEVAAPAVGNRFPGNMDYQGAGLRPQFPAERKWALGLQSRAHPREIMTEVLKALQELNVCWKKIGHYTMKCRWVAGILGHHEGMVNNHDHYSGDDSAVIENGAISKSNVVKFEMQLYKTREEKYLLDLQRVQGPQFLFLDLCASFLAQLHVL 1165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0959 1165 SUPERFAMILY KA1-like 982 1164 IPR028375 -
Lele14g0959 1165 CDD UBA_SnRK1_plant 947 987 - -
Lele14g0959 1165 SMART uba_6 948 985 IPR015940 -
Lele14g0959 1165 SUPERFAMILY Protein kinase-like (PK-like) 670 943 IPR011009 -
Lele14g0959 1165 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 612 929 - -
Lele14g0959 1165 CDD STKc_CDK9_like 114 398 - -
Lele14g0959 1165 MobiDBLite consensus disorder prediction 45 63 - -
Lele14g0959 1165 FunFam probable serine/threonine-protein kinase At1g54610 101 196 - -
Lele14g0959 1165 ProSitePatterns Serine/Threonine protein kinases active-site signature. 234 246 IPR008271 GO:0004672|GO:0006468
Lele14g0959 1165 MobiDBLite consensus disorder prediction 470 484 - -
Lele14g0959 1165 CDD AMPKA_C 1043 1162 - -
Lele14g0959 1165 Gene3D Phosphorylase Kinase; domain 1 101 196 - -
Lele14g0959 1165 FunFam probable serine/threonine-protein kinase At1g54610 197 437 - -
Lele14g0959 1165 FunFam Non-specific serine/threonine protein kinase 1049 1163 - -
Lele14g0959 1165 Gene3D Transferase(Phosphotransferase) domain 1 664 1006 - -
Lele14g0959 1165 Pfam Kinase associated domain 1 1122 1162 IPR001772 -
Lele14g0959 1165 ProSitePatterns Protein kinases ATP-binding region signature. 120 143 IPR017441 GO:0005524
Lele14g0959 1165 MobiDBLite consensus disorder prediction 452 469 - -
Lele14g0959 1165 ProSiteProfiles Protein kinase domain profile. 114 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g0959 1165 MobiDBLite consensus disorder prediction 405 499 - -
Lele14g0959 1165 Pfam Protein kinase domain 114 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g0959 1165 Pfam Protein kinase domain 673 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g0959 1165 MobiDBLite consensus disorder prediction 417 451 - -
Lele14g0959 1165 ProSiteProfiles Kinase associated domain 1 (KA1) profile. 1116 1164 IPR001772 -
Lele14g0959 1165 Gene3D Transferase(Phosphotransferase) domain 1 197 438 - -
Lele14g0959 1165 ProSitePatterns Protein kinases ATP-binding region signature. 679 702 IPR017441 GO:0005524
Lele14g0959 1165 Gene3D Kinase associated domain 1, KA1 1049 1163 - -
Lele14g0959 1165 ProSitePatterns Serine/Threonine protein kinases active-site signature. 792 804 IPR008271 GO:0004672|GO:0006468
Lele14g0959 1165 CDD STKc_AMPK_alpha 670 925 - -
Lele14g0959 1165 MobiDBLite consensus disorder prediction 1 71 - -
Lele14g0959 1165 FunFam Non-specific serine/threonine protein kinase 664 1003 - -
Lele14g0959 1165 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 946 986 IPR015940 -
Lele14g0959 1165 SUPERFAMILY Protein kinase-like (PK-like) 107 404 IPR011009 -
Lele14g0959 1165 FunFam Non-specific serine/threonine protein kinase 663 754 - -
Lele14g0959 1165 SMART serkin_6 673 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g0959 1165 SMART serkin_6 114 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g0959 1165 ProSiteProfiles Protein kinase domain profile. 673 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0959 Lele-ChrLele14 19941648 19953287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0959 677 915 Core Cell Cycle Gene Families AT5G10270 29.352 5.25e-25 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Lele14g0959 Pkinase 6.3e-69 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g0959 14 19941648 19953287 Lele15g1408 15 8181462 8185942 hybridization
Lele14g0959 14 19941648 19953287 Lele16g1436 16 8185854 8190049 hybridization