Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0946 ATGAACTACACCCCTGTGCCTGAATTGCAGCCAAATCCAACGCCAGCGTCCCTTTCTTCTTATCCACCTTTTGTAGCCGCTTATTTTCCCGCATCTTACCCTCCCCATTACCGAGTATACATTAAAAACTCTAATCCTTCTGTGGTGAACCCTCCTGGTGTTACTTCCTATGCCCCCTTGACCTCCGGTTCAGTTAGCCATCTGACTCATGAAGCCCATGTTGATTACTCATATGCTCACAACCCTATTGCAGATTCGAGCTCCGGATACTATTTTGACCCGAATGCTCAGAATTGGGCTGCTAGGGAGGCTGTTAAGCAGTTCGGGGTGGACCCGGTTGGCTATGTAGCTGCTATCCCTGTGGCTTCTACTGGATTAGAGCAATTGGCTACTACTGCAAATGCTAACTACGCTTGGTGGGCTCACGCCACAACCCAACCTCATGGAAATGGGGCACGGAAGAACCCCCCGAAGAAGAAACCCAAAACTAAGGCTGCCCAATCTGCATATTGTGAAGTTTGCAAGATAGATTGTACCACCAAGGATGTTCTGGACCAGCATAAGTTAGGAAAGAAGCACAAGAAGAACTTGGAGAAATTAAAAGAAGCATTAAGGCCGCCACAAGTTCTTGTTCCACCCGCAGCGTCATCTAATCCTGTGATTGGACCTCAACCGGAGCGAACCAAGAGCAAATCTGGGAGCAAGGGTAAAAGGAAAGCGATTGAGACACCAGAAGGTTTGGAGAAGAAGAAAAAGAAGGTTCTTGAAGGTGGGGCAGCCGCAGAAGCAGTTAAAATATGCACTATTTGTAATGTGGTCTGTAATAGCGAGACTGTATTTAATTATCATCTTGCAGGGCAAAAGCATGCTGCTATGATGAAGAAACAAGCTTCTTGA 897 0.4682 MNYTPVPELQPNPTPASLSSYPPFVAAYFPASYPPHYRVYIKNSNPSVVNPPGVTSYAPLTSGSVSHLTHEAHVDYSYAHNPIADSSSGYYFDPNAQNWAAREAVKQFGVDPVGYVAAIPVASTGLEQLATTANANYAWWAHATTQPHGNGARKNPPKKKPKTKAAQSAYCEVCKIDCTTKDVLDQHKLGKKHKKNLEKLKEALRPPQVLVPPAASSNPVIGPQPERTKSKSGSKGKRKAIETPEGLEKKKKKVLEGGAAAEAVKICTICNVVCNSETVFNYHLAGQKHAAMMKKQAS 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0946 298 SMART ZnF_U1_5 262 296 IPR003604 GO:0003676|GO:0008270
Lele14g0946 298 SMART ZnF_U1_5 166 200 IPR003604 GO:0003676|GO:0008270
Lele14g0946 298 SUPERFAMILY beta-beta-alpha zinc fingers 146 201 IPR036236 -
Lele14g0946 298 MobiDBLite consensus disorder prediction 201 245 - -
Lele14g0946 298 Pfam Zinc-finger of C2H2 type 266 289 - -
Lele14g0946 298 Pfam Zinc-finger of C2H2 type 170 193 - -
Lele14g0946 298 PANTHER ZINC FINGER PROTEIN 385B-LIKE 95 297 - -
Lele14g0946 298 SUPERFAMILY beta-beta-alpha zinc fingers 263 296 IPR036236 -
Lele14g0946 298 Gene3D Classic Zinc Finger 152 200 - -
Lele14g0946 298 Gene3D Classic Zinc Finger 245 297 - -
Lele14g0946 298 SMART c2h2final6 169 193 IPR013087 -
Lele14g0946 298 SMART c2h2final6 265 289 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0946 Lele-ChrLele14 19847548 19849832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0946 162 295 C2H2 Transcription Factor Family AT5G61190 27.922 2.72e-06 47.0