Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0942 ATGGAGCTTCCTGAGTGGACGGATTTAGTAAAAACTGCAAGATTCAAAGAACTTGCCCCATATGATCCTGACTGGTATTATGTTAGAGCTGCCTCCGTGGCAAGAAAGATCTACTTGAGAGGTGGTCTTGGTGTTGGTGCCTTTCAAAGAATTTATGGTGGAAGCCAGAGGAATGGAAGCCGCACCCCACATTTCTGCAAGAGCAGTGGAGCCATTGCCAGACACATTCTTCAGCAGTTGCAAAACATGAACATTATTGAGCTTGATCCAAAAGGGCAAGTTATAGGTAGGAAGATCACTTCGAGTGGTCAAAGGGATCTTGACCAGGTTGCTGGCCGAATTGTGGTTGCACCTTGA 357 0.4622 MELPEWTDLVKTARFKELAPYDPDWYYVRAASVARKIYLRGGLGVGAFQRIYGGSQRNGSRTPHFCKSSGAIARHILQQLQNMNIIELDPKGQVIGRKITSSGQRDLDQVAGRIVVAP 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0942 118 Gene3D - 1 117 IPR036388 -
Lele14g0942 118 Pfam Ribosomal protein S19e 1 115 IPR001266 GO:0003735|GO:0005840|GO:0006412
Lele14g0942 118 FunFam 40S ribosomal protein S19 1 118 - -
Lele14g0942 118 SMART Ribosomal_S19e_2 1 117 IPR001266 GO:0003735|GO:0005840|GO:0006412
Lele14g0942 118 PANTHER 40S RIBOSOMAL PROTEIN S19 2 114 IPR001266 GO:0003735|GO:0005840|GO:0006412
Lele14g0942 118 SUPERFAMILY "Winged helix" DNA-binding domain 1 116 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0942 Lele-ChrLele14 19830216 19831053 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0942 1 118 Cytoplasmic Ribosomal Protein Gene Family AT3G02080 80.508 9.08e-70 204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g0942 14 19830216 19831053 Lele15g1426 15 8307318 8309187 hybridization
Lele14g0942 14 19830216 19831053 Lele16g1453 16 8286002 8287647 hybridization