Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0927 ATGATTAAGATTCCAAAAGATCCATCAGATGTTCCAAGAAAACAGGAAGATTCATCAAGTAATTATGAGAAAGCAAAGGAATCATCGGCATCGGCATCATCATCATGGAGCAGCATGGAACAGCAATGGGTGAGGTTGAAGGATCCGAGGATAGTGAGGGTTGCCAGATCCTGTGGAGGCAAAGACAGGCACAGCAAGGTTTGCACCATACGAGGTTTGAGAGACAGAAGAGTGAGGTTGTCGGTTCCTACAGCCATTCAATTGTATGATCTTCAAGAGAGGCTAGGGTTCAATCAACCCAGTAAGGTTATTGATTGGCTTCTTAATGCTGCCAAGAATGACATAGATGAGCTTCCTCCTCTTCCACCATTAGATCTGGCCCTCCTTCATCATCATGCTATTCTCACCTCTAACAATAATTCTCAGCCTAAAAAAGAAGAAGCTGCAGTTGGCTGGGAAGCTTCCAATAATAACACTACTTTCTGGAAATTGATAGAGCCCAAAGAAGCTTCCTCGTCTCATGATGATGATGTTAAACAAGGAAGCAATAACGATAATGATGAGTTATCTCATCATGCTGTACAAGTTGTTCCACATCATCATCATCATCCCTCCTTTGTTGGGTATAACCAGTGGGAAGGTTCTGGATCAGGTGGTCATCGTGTTTCTCATCAGACAGATTTGCAAAGCATTAACGTTGTACCTTTCTCATCAACTTTGTCTTTATGCACTGGGGATTATTCTCATCACCATCATTTTGCTTCACATTTTGGAGCGAATATTGACATGGATCATAATAATAATATTCCAAGACAAGTCAACTATAATAACCACTCTCCCATGATGCTGCAGAGTTCTAGTTCAAATCTGTACCCTATCTCCTCCATGGAACAATCGTTGAATAAACCCTTTGGGTTGAGCATGATGACTCCTAAAAACACTTCAGATCAGAGCCATCATCAGTCACATAACCACCACCTTCAGAATTTTCCCGCCAAGTGA 1002 0.4182 MIKIPKDPSDVPRKQEDSSSNYEKAKESSASASSSWSSMEQQWVRLKDPRIVRVARSCGGKDRHSKVCTIRGLRDRRVRLSVPTAIQLYDLQERLGFNQPSKVIDWLLNAAKNDIDELPPLPPLDLALLHHHAILTSNNNSQPKKEEAAVGWEASNNNTTFWKLIEPKEASSSHDDDVKQGSNNDNDELSHHAVQVVPHHHHHPSFVGYNQWEGSGSGGHRVSHQTDLQSINVVPFSSTLSLCTGDYSHHHHFASHFGANIDMDHNNNIPRQVNYNNHSPMMLQSSSSNLYPISSMEQSLNKPFGLSMMTPKNTSDQSHHQSHNHHLQNFPAK 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0927 333 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 17 331 IPR005333 GO:0003700
Lele14g0927 333 MobiDBLite consensus disorder prediction 1 23 - -
Lele14g0927 333 MobiDBLite consensus disorder prediction 1 34 - -
Lele14g0927 333 Pfam TCP family transcription factor 60 170 IPR017887 -
Lele14g0927 333 MobiDBLite consensus disorder prediction 303 333 - -
Lele14g0927 333 MobiDBLite consensus disorder prediction 303 317 - -
Lele14g0927 333 ProSiteProfiles TCP domain profile. 60 118 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0927 Lele-ChrLele14 19721026 19722027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0927 23 243 TCP Transcription Factor Family AT3G02150 40.678 7.42e-50 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lele14g0927 TCP 2.4e-28 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g0927 14 19721026 19722027 Lele15g1442 15 8421494 8422489 hybridization
Lele14g0927 14 19721026 19722027 Lele16g1469 16 8398713 8399726 hybridization