Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0916 ATGGCAGCGTCCGATTCGCGAGCCCACTTGTTCGGCCAGAATGAGATTAACAGGGACAAGCCAGATAAAACTGAATTCTATTTTGTAGGAGCTGGACTCTTTACCAGCATCACATTGGCACTCTACCCAGTTTCTGTAGTGAAGACCAGACTGCAGGTTGCGTCGAGGGATACTGCAGAGATAAATGCATTTTCTGTTATAAAGGGATTACTTAGAACAGATGGCGTTCCCGGGCTGTATAGAGGATTTGGCACAGTCATCACTGGTGCAATTCCTGCCAGAATCATATTTTTTACTACCCTAGAGACCACTAAGTTGGCCGCCTTCAGGATGGTTGAACCATTTAAACTCTCCGAAACCGCCCAGGCAGCCATAGCAAATGGAGTTGCGGGCTTGACATCATCACTTTTAGCTCAAGCTGTGTTTGTTCCAATTGATGTGGTTCGACAGTTTGATTCATGTCATCTATATGTGGGCTGTATGTCAATTGATACTCAGGTGAGCCAAAAGTTGATGGTGCAAGGCTGCTCAAGTCATGCTCAATATAATGGCGGTCTGGATATTGCTCGTAAAGTGTTAAGATCAGATGGTATCAGGGGATTTTATAAAGGATTCAGTCTTTCTGTTATGACTTATGCTCCTTCGAGTGCTGTATGGTGGGCAAGCTATGGTTCAAGCCAACGCTTAATTTGGAGATTCTTGGAACATAATGCCGAAAATAAGGAAGGCAAACCCAGTGTGCAGAAGATCGTGTTAGTTCAGGCTACTGGGGCAATCTTTGCTGGTGCAACTGCATCCTGCATTACAACACCATTGGTGATGGGACATGAAAATAAAAGCTCCATGAAACAAGTGGTCAAAGACTTGATAAACGAGGATGGTTGGAAATGTTTATACAGAGGGTTAGGCCCAAGATTTTTCAGCATGGCGGCATGGGGTACTTCCATAATATTGGCTTATGAATATCTGAGTAAGATCTGTCTCTATGCTCTATCTTGTGCCGTTGTTCTGGTAGTGTATTCAAATACTGAATAG 1035 0.4386 MAASDSRAHLFGQNEINRDKPDKTEFYFVGAGLFTSITLALYPVSVVKTRLQVASRDTAEINAFSVIKGLLRTDGVPGLYRGFGTVITGAIPARIIFFTTLETTKLAAFRMVEPFKLSETAQAAIANGVAGLTSSLLAQAVFVPIDVVRQFDSCHLYVGCMSIDTQVSQKLMVQGCSSHAQYNGGLDIARKVLRSDGIRGFYKGFSLSVMTYAPSSAVWWASYGSSQRLIWRFLEHNAENKEGKPSVQKIVLVQATGAIFAGATASCITTPLVMGHENKSSMKQVVKDLINEDGWKCLYRGLGPRFFSMAAWGTSIILAYEYLSKICLYALSCAVVLVVYSNTE 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0916 344 ProSiteProfiles Solute carrier (Solcar) repeat profile. 249 326 IPR018108 -
Lele14g0916 344 Pfam Mitochondrial carrier protein 125 230 IPR018108 -
Lele14g0916 344 Pfam Mitochondrial carrier protein 257 326 IPR018108 -
Lele14g0916 344 Pfam Mitochondrial carrier protein 38 106 IPR018108 -
Lele14g0916 344 Gene3D Mitochondrial carrier domain 2 160 IPR023395 -
Lele14g0916 344 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 4 328 - -
Lele14g0916 344 SUPERFAMILY Mitochondrial carrier 20 323 IPR023395 -
Lele14g0916 344 Gene3D Mitochondrial carrier domain 161 329 IPR023395 -
Lele14g0916 344 ProSiteProfiles Solute carrier (Solcar) repeat profile. 122 229 IPR018108 -
Lele14g0916 344 ProSiteProfiles Solute carrier (Solcar) repeat profile. 22 107 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0916 Lele-ChrLele14 19656400 19659375 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0916 22 327 Chloroplast and Mitochondria Gene Families AT5G15640 64.873 4.97e-146 413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g0916 14 19656400 19659375 Lele15g1451 15 8476150 8479360 hybridization
Lele14g0916 14 19656400 19659375 Lele16g1478 16 8462101 8465163 hybridization