Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0915 ATGGGCATGTTCGCCACCCGCACTCAACTAGCCATGGAAACCCTATTGATCGAGACCGTCCCTCTTGCTCCATTTGACTGCATTCTTCCCACCTCCCCCTCTCTCCACTCCCCATCACCTCCTCCACGCATCACCTTATCCCATCCTCCCGCTATTCCACCATCGTCCTCCTTAGTAGAGGTTAGGAGAAGAAGACCAGAAACAGAGCAAAATGGTTTTCTGTTCGAACGCAAGCTCCGGCATTCTACTTTTATTCTTACTGACTTGCTTTCCCTTCCCTTCTACAGGCTTCACATTTCCATTTGCAATCCTTATCATTTTCACAATCAAATGGTTTATGTTTCAGAAGCCTATGATCCACTAGACCCAAATGGAAATATCACAATCAAATGGGATGTCATCAACTGGACCCCTGATGGCTATGTTGATCCAACCAATGCGGTTGCTTCATTTCAGGTAACTGTCGGCAATGCTGGAACCAATAACAGAACAGTCAAGGTGCCAAAAAACTTCACCCTGAGAGCACCAGGACCAGGTTATACTTGTGGCCCAGCAAAAATTGTGAAACCCACTCTATCCATAACACTAGACAAAAGGAGAGCAACACAAGCACTCATGACATGGAATGTAACATGTACGTATTCACAATTTCTAGCTCAGAAAAACCCTGCTTGCTGCGTCTCCCTCTCTTCTTTCTCTAACGATACTATTGTGCCCTGCCCAACATGTTCATGTGGCTGTCAGGGCAACTCATCTAGCTGTGTAGAGTCAGATTCAGCTCGTTTGAAACCTATGGTTCAATGTACTAGTCATATGTGCCCCATTCAAGTCCACTGGCATGTTAAGGCTAACGAAAAGGAGTTCTGGCGAGTTCAGATCAATATTACTAATTTTAATTATAGGATGAGCTTTCCTGATTGGGACTTGATTGTTCAACACCCAAACGTTGGCAATCTGACCCACCTTTTCGGTTTCATCCACAAGGGATTAGCACCAGACGCAGCTCTGAATGATACAGTAATTCTATGGGGAATGAAGTTGTACAATGATGTTGTTAACCCAGCAAGACCTTTTGGTAATGTGCAGACAGAGCTACTTTTTGGAAAGGAAAAATCAAACTTGAGTTTGGAGAAGGGATGGGCTTTTCCTCAGAGAATCTATTTCAATGGTGACAGATGTATGATGCCACCACCAGATGCATACCCTTTGACTTTGTTGGCCAATGCCAGTTCCCGGCAACGACTGAAAGAAACTCCACTTCTTAGCACTGCAACCAAGCTTGAAAGTACCGCTAATCTATCAACTCGGTGGTATTCTTTCCACACACACCCTCTTTCTTCTTTGCTGGAAGCTTATGATCCACTTGACCCAAATGGAAATATCACAATCAAATGGGATGTCATCAGCTGGACCCCTGATGGTTATGTTGCTGTAGTTAGCATGCAAAATTTCCAAAAGTTTCGTCACATTTCAGCACCAGGGTGGTTTTTAGGATGGACATGGGCAAAGAAGGAGGTGATATGGAGCATGATGGGAGCACAGGCCACTGAACAAGGGGATTGTTCAAAATTTAAGGGAAATGTCCCACATTGCTGTAAAAAGAACCCGACAGTTGTAGATTTACTTCCAGGAACGCCTTACAATCAGCAAATTGCAAATTGCTGCAAAGGTGGGGTACTCAGCTCATGGGCACAGGATCCATCCAATGCGGTTGCTTCATTTCAGGTAAGTGTTGGCAGAGCTGGAACCACTAACAAAACAGTCAAGGTTCCCAAAAACTTCACCCTGAATGCACCAGGATCAGGTTATACTTGTGGGCCAGGAAAAATTGTGAAACCCACTCTATTCATAACACCAGGCAAAAGGAGAGTAACACAAGCACTCATGACATGGAATGTGGTATGCACTTATTCACAATTTCTAGCTCAGAAAACACCTACTTGCTGTGTCTCCCTCTCTTCTTTCCATAATGATACTATTGTACCTTGCCCAACGTGTTCATGCGGTTGCCGGGGCAGCTCATCTAGCTGTGCAAAGTCAGGTTCAGCTCATTTGAAACCTTTGGTTCAATGTACTAGTCATATGTGCCCCGTCCAAGTTCACTGGCATGTTAAGGCTAACTACAAGGATTACTGGCGAGTTAAGATCACTGTTACCAATTTTAATTACAGGATGAATTATTCTGACTGGAACTTGGTTGTTCAAGATCCCAACTTTGACAATCTGGCCCAGCATTTCGGTTTCAACTACAAGAGATTAACATTGAACGGAGCAATAAATGATACAGCAATGCTTTGGGGGATTAAGTTGTACAATGATGTTCTGAACCAAGCTGGCGTTTCTGGTAATGTACAAGGAGAGCTACTTTTTCGAAAGGAGAAATCAAGCTTCGGTTTCAACAAGAAGGGCTGGGGTTTTCCTCGGAGGATGCATTTCAATGGTGACAATTGTGTGATGCCACCACCAGATGCATACCCTTTGTTGCCCAATGCCATTTCTCCAATTAAGAATTAA 2514 0.4403 MGMFATRTQLAMETLLIETVPLAPFDCILPTSPSLHSPSPPPRITLSHPPAIPPSSSLVEVRRRRPETEQNGFLFERKLRHSTFILTDLLSLPFYRLHISICNPYHFHNQMVYVSEAYDPLDPNGNITIKWDVINWTPDGYVDPTNAVASFQVTVGNAGTNNRTVKVPKNFTLRAPGPGYTCGPAKIVKPTLSITLDKRRATQALMTWNVTCTYSQFLAQKNPACCVSLSSFSNDTIVPCPTCSCGCQGNSSSCVESDSARLKPMVQCTSHMCPIQVHWHVKANEKEFWRVQINITNFNYRMSFPDWDLIVQHPNVGNLTHLFGFIHKGLAPDAALNDTVILWGMKLYNDVVNPARPFGNVQTELLFGKEKSNLSLEKGWAFPQRIYFNGDRCMMPPPDAYPLTLLANASSRQRLKETPLLSTATKLESTANLSTRWYSFHTHPLSSLLEAYDPLDPNGNITIKWDVISWTPDGYVAVVSMQNFQKFRHISAPGWFLGWTWAKKEVIWSMMGAQATEQGDCSKFKGNVPHCCKKNPTVVDLLPGTPYNQQIANCCKGGVLSSWAQDPSNAVASFQVSVGRAGTTNKTVKVPKNFTLNAPGSGYTCGPGKIVKPTLFITPGKRRVTQALMTWNVVCTYSQFLAQKTPTCCVSLSSFHNDTIVPCPTCSCGCRGSSSSCAKSGSAHLKPLVQCTSHMCPVQVHWHVKANYKDYWRVKITVTNFNYRMNYSDWNLVVQDPNFDNLAQHFGFNYKRLTLNGAINDTAMLWGIKLYNDVLNQAGVSGNVQGELLFRKEKSSFGFNKKGWGFPRRMHFNGDNCVMPPPDAYPLLPNAISPIKN 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0915 837 Pfam COBRA-like protein 475 638 IPR006918 GO:0010215|GO:0016020
Lele14g0915 837 Pfam COBRA-like protein 142 215 IPR006918 GO:0010215|GO:0016020
Lele14g0915 837 PANTHER PROTEIN COBRA 447 832 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0915 Lele-ChrLele14 19648624 19655479 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0915 450 833 COBRA Gene Family AT3G02210 71.930 0.0 612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g0915 14 19648624 19655479 Lele15g1453 15 8489130 8492465 hybridization
Lele14g0915 14 19648624 19655479 Lele16g1480 16 8475948 8479276 hybridization