Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0914 ATGGCTTTCTGTTTGATACCCGAAATTAGACCCCTCTCGAAAGCAAGCTCAGGCATTCTATTTTTGTTCCTACTCACTTGCTTTTGCTTCCCTTCTACAGAAGCTTATGATCCACTAGACCCGAATGGAAATATCACAATCAAATGGGATATCATCAGCTGGACCCCTGATGGTTATGTTGCTGTAGTTACTATGAACAACTTCCAACAATATCGTCACATTGCAGCACCAGGGTGGACATTAGGATGGACATGGGCAAAGAAGGAGGTGATATGGAGCATGATGGGAGCACAGGCCACTGAACAAGGGGATTGTTCAAAATTTAAGGGAAATGTCCCACATTGCTGTAAAAAGAACCCGACAGTTGTAGATTTACTTCCAGGAACGCCTTACAATCAGCAAATTGCAAATTGCTGCAAAGGTGGGGTACTCAGCTCATGGACACAGGATCCACCCAATGCGGTTGCTTCATTTCAGGTAAGTGTTGGCAGAGCTGGAACCACTAACAAAACAGTCAAGGTTCCCAAAAACTTCACCCTGAATGCACCAGGACCAGGTTATACTTGTGGGCCAGGAAAAATTGTGCCGCCCACTAAATTCATACAAGCAGACAAAAGGAGAGTAACACAAGCACTCATGACATGGAACGTAACATGTACGTATTCACAATTTCTAGCTCAGAAAACTCCTACTTGCTGCGTCTCCCTTTCTTCTTTCTATAATGATACTATTGTACCCTGCCCAACGTGTTCATGTGGCTGTCGGGGCAATTCATCTGCCTGTGTAGGGCCAGGTTCACCCCGCCTGGAATCAGTTGTTTCTGGAAAAAATGGTTTGTCACCTTTGGTTCAATGTACTAGTCACATGTGCCCAATTCGAGTCCATTGGCATGTTAAGGTTAACTACAAGGAGTACTGGCGTGTTAAGATCACCATTACCAATTTTAATCACAGGATGAATTATTCGGAGTGGAACTTGGTTGTTCAACACCCAAACCTTGACAATCTGACCCAACTTTTCAGTTTCAACTACAAGGGATTAACACCATACGGAGTAATAAATGATACAGCAATGCTTTGGGGAATTAAGTTCTACAATGATTTTCTAAACGTAGCTGGCCCCTCTGGTAATGTACAGTCAGAGCTACTTTTCCGAAAGGATAAATCGACTTTCACTTTCGAGAAGGGCTGGGCTTTTCCTCGAAGGATCTATTTTAATGGTGACAATTGTGTGATGCCACCACCAGATGCATACCCTTGGTTGCCTAATGCCAGTTCCCGGCAAGAAGTTTCCCTGCTCACCTTAGTGATATCTTGTTTGGCATCCCTGGTCTTTTACACGTTTGCTTGA 1350 0.4393 MAFCLIPEIRPLSKASSGILFLFLLTCFCFPSTEAYDPLDPNGNITIKWDIISWTPDGYVAVVTMNNFQQYRHIAAPGWTLGWTWAKKEVIWSMMGAQATEQGDCSKFKGNVPHCCKKNPTVVDLLPGTPYNQQIANCCKGGVLSSWTQDPPNAVASFQVSVGRAGTTNKTVKVPKNFTLNAPGPGYTCGPGKIVPPTKFIQADKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVPCPTCSCGCRGNSSACVGPGSPRLESVVSGKNGLSPLVQCTSHMCPIRVHWHVKVNYKEYWRVKITITNFNHRMNYSEWNLVVQHPNLDNLTQLFSFNYKGLTPYGVINDTAMLWGIKFYNDFLNVAGPSGNVQSELLFRKDKSTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASSRQEVSLLTLVISCLASLVFYTFA 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0914 449 Pfam COBRA-like protein 59 222 IPR006918 GO:0010215|GO:0016020
Lele14g0914 449 PIRSF COBRA 10 449 IPR006918 GO:0010215|GO:0016020
Lele14g0914 449 PANTHER PROTEIN COBRA 24 439 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0914 Lele-ChrLele14 19642905 19646231 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0914 18 440 COBRA Gene Family AT3G02210 75.000 0.0 680
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g0914 14 19642905 19646231 Lele15g1454 15 8493016 8495122 hybridization
Lele14g0914 14 19642905 19646231 Lele16g1481 16 8479922 8481991 hybridization