Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0908 ATGGTAGCTACGATGATCATGGGTTCAGAGAAAGCATGGAAGAAAGGGCCTTGGACTCTTGAAGAGGATAAGCTGCTTAGTGAATACGTGAGCTTGCATGGTGAAGGGAGGTGGAGTTCAGTGGCCAAGTTTACAGGGTTAAATAGGAGTGGGAAAAGTTGCAGGTTGAGGTGGGTGAACTATTTGAAGCCAGGGTTGAAGAAAGGCCGCTTAACACCTCAAGAAGAAGCTATCATATTTGAAATCCATGCTATGCTGGGTAACAAGTGGTCTACAATAGCAAAATATTTGCCAGGTAGAACAGACAATGAGATTAAGAACTACTGGAGAACTCAATTCAAGAAGAAAGACAAATCCACTCGTATTAATAAGAAGCAAGAGAAGAGAAGATCGAGAATTCTAAAACAGATGAAACAACAAGAGCAGCAGCAACAACGACAACCTCATCAGCACGTTGTACAAAGCAGCATGTCGTCTCATGCAGAGTCAAACACTCAAGCAAACGTTTCTGCTGGTGGGACTGTTCTAGAAGACAACTACCATCCACTTACAACCACGGAAGACCAATATAATTACTTGATGCCTTTCATGTACCAAGATTACTTTCCATCCCCATGGCCTGAAAATACTGTAGAACAAGATGAAGGATTGTTGGTTACGTTATGGAACCTTGACGAAGAAACAGTACAAGCTCATCACGGGGACAATATTCAGTTCAACGAAAATTCCATTCATCATAACCAAATTACAACTTCTTGTTTCGATGACATTTCCAACAACCTCTGCTTTGAAAAATACGTGTCCAGCTCTACTGCCTGA 819 0.4176 MVATMIMGSEKAWKKGPWTLEEDKLLSEYVSLHGEGRWSSVAKFTGLNRSGKSCRLRWVNYLKPGLKKGRLTPQEEAIIFEIHAMLGNKWSTIAKYLPGRTDNEIKNYWRTQFKKKDKSTRINKKQEKRRSRILKQMKQQEQQQQRQPHQHVVQSSMSSHAESNTQANVSAGGTVLEDNYHPLTTTEDQYNYLMPFMYQDYFPSPWPENTVEQDEGLLVTLWNLDEETVQAHHGDNIQFNENSIHHNQITTSCFDDISNNLCFEKYVSSSTA 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0908 272 Gene3D - 71 116 - -
Lele14g0908 272 FunFam Myb transcription factor 15 67 - -
Lele14g0908 272 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Lele14g0908 272 MobiDBLite consensus disorder prediction 116 167 - -
Lele14g0908 272 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Lele14g0908 272 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 66 IPR017930 -
Lele14g0908 272 SUPERFAMILY Homeodomain-like 13 109 IPR009057 -
Lele14g0908 272 SMART sant 14 64 IPR001005 -
Lele14g0908 272 SMART sant 67 115 IPR001005 -
Lele14g0908 272 MobiDBLite consensus disorder prediction 137 167 - -
Lele14g0908 272 CDD SANT 17 62 IPR001005 -
Lele14g0908 272 CDD SANT 72 111 IPR001005 -
Lele14g0908 272 MobiDBLite consensus disorder prediction 117 132 - -
Lele14g0908 272 Coils Coil 123 144 - -
Lele14g0908 272 Gene3D - 14 67 - -
Lele14g0908 272 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 10 177 IPR044676 GO:0003700|GO:0006355|GO:0043565
Lele14g0908 272 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 117 IPR017930 -
Lele14g0908 272 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Lele14g0908 272 Pfam Myb-like DNA-binding domain 68 111 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0908 Lele-ChrLele14 19596807 19597841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0908 14 244 MYB Transcription Factor Family AT3G30210 46.983 1.17e-67 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele14g0908 Myb_DNA-binding 2.4e-17 CL0123