Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0893 ATGGCTAATACCTCTCAACTGCCATCCCTGTTTTCCCTCGAAGATGAATTTGAAGAATCAGGCCCTGATGAACAGGTATCTGATCTCCCATCACAGACTGCCCACGATCACTGGTGCCCCGATTCCTCCAACCCATTTGCAATCGTAGCCTTCGACCATTTGAGCAACCATTCAAACTGGTACTCCGATTCGGACTCCGATTCGGTGAGTTGCTTTGTTACAGATCTTTTTCAAAATCACTCGTCGGGGAACTTTTACCGTCGTGGTAACGATAGTTCTGATATTAATCCCTTTTCGGCCGTTCCTTGCGATGGTCACGGTGAAGAAGGGTCAAGTTATGCGGAGACGGAATTAGGGTCTGGGTTTGGAACGGGAAAAAATGTTGGAATTTCTGCAGTAGGCGAGACATCGGGCTCTGAAAGGGTTCGTTCGGACACTGATGGGCTTCGAATGGTCGGGTTTAGTTTTGTGTCGGATTCAAATACTGATGAAGAGCTTGATAGGGCTATAGAATTCAGTTCTGGTGAAAATGATGGCAATAGAATCAGTGGCTTTGACGATTTTGATGTTCATTTTTGTTGGGACAGCCTTTGCTTGGAGGATCAGAGGACCCCCAATGAACATTTTGAGTGGGAGGATTTAGAGGAGAGAGTCAATGATGGAGAAGACTTGAGCGTGATGATTGGTGAGGTTGATGATCAATCAGTAGCATCTGGATTTTCCTATGGGGAAGAGTCGGGTGAAGAGGCATTGAGATACCTTGAATGGGAAATTCTGTTAGCGGTCAACAATTTAGAGAGGAATTCAAGCTTGGATCATGGCGCCACTGCAGGTTCCTTCTTAACGGTTCAGGATGATGGTATGAACACAGCTGATTATGATATATTTTTTGGGCAATTCCTGGAAAATGAGAGTTCCTTAAAAGGCGGTCCTCCTACCGCTAAAAGTGTTATGGAGAATCTTCCTTTAGTAGAATTGACAGAGGAGGACTTGGTGGGGGAGAATGTAGCTTGTGCTGTTTGCAAAGATGAAATCATATGGAAGGAAAAAGTGAGAAGGCTTCCCTGCTCGCACTTTTACCATGGGGACTGCATTATGCCATGGTTGAGTATTCGCAATACATGCCCTGTTTGTCGGTTTGAACTGCCCACAGATGATCCCGATTATGAGCAGAGGAAGAGTCACAGAACTGCTCGTGAATCAGCTCATGATATGTTGGAGTTTTCACTGTAG 1233 0.4534 MANTSQLPSLFSLEDEFEESGPDEQVSDLPSQTAHDHWCPDSSNPFAIVAFDHLSNHSNWYSDSDSDSVSCFVTDLFQNHSSGNFYRRGNDSSDINPFSAVPCDGHGEEGSSYAETELGSGFGTGKNVGISAVGETSGSERVRSDTDGLRMVGFSFVSDSNTDEELDRAIEFSSGENDGNRISGFDDFDVHFCWDSLCLEDQRTPNEHFEWEDLEERVNDGEDLSVMIGEVDDQSVASGFSYGEESGEEALRYLEWEILLAVNNLERNSSLDHGATAGSFLTVQDDGMNTADYDIFFGQFLENESSLKGGPPTAKSVMENLPLVELTEEDLVGENVACAVCKDEIIWKEKVRRLPCSHFYHGDCIMPWLSIRNTCPVCRFELPTDDPDYEQRKSHRTARESAHDMLEFSL 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0893 410 Pfam Ring finger domain 338 379 IPR001841 -
Lele14g0893 410 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 219 383 - -
Lele14g0893 410 CDD RING-H2_RNF126_like 338 379 - -
Lele14g0893 410 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 300 385 IPR013083 -
Lele14g0893 410 SMART ring_2 338 378 IPR001841 -
Lele14g0893 410 SUPERFAMILY RING/U-box 318 386 - -
Lele14g0893 410 ProSiteProfiles Zinc finger RING-type profile. 338 379 IPR001841 -
Lele14g0893 410 MobiDBLite consensus disorder prediction 1 37 - -
Lele14g0893 410 FunFam E3 ubiquitin-protein ligase RING1-like 299 385 - -
Lele14g0893 410 MobiDBLite consensus disorder prediction 389 410 - -
Lele14g0893 410 MobiDBLite consensus disorder prediction 389 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0893 Lele-ChrLele14 19485662 19486894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0893 256 393 C3H Transcription Factor Family AT5G15820 50.725 1.06e-44 156