Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0883 ATGGAGTCTCCATTCTCCAGAACTTGTGTCTGGTTTCTAGGACATTACAATTGTATGGGGAAACTAAGAGAAGCTGTTCTTTGTTTTGTGGCACTACTTTGGTTATGGGGTTCTGCAGCAAATGCTGTTCTTTCTCCTAAAGGAGTGAACTTTGAAGTGCAAGCTTTAATGGGCATAAAAGCTTCTTTGCGGGATCCTCATGGTGTCTTAGATAATTGGGATGTGGATGCAGTTGATCCTTGTAGCTGGACTATGGTCACCTGTTCGTCGGACAACTTGGTCATTGGCCTGGGTAGTCCCAGTCAAAGTCTATCAGGTACTCTGTCTCCAAGCATAGGCAACCTAACGAACCTTCAGATTGTGTTGCTACAGAATAATAATATAACAGGTCTAATACCTTCAGAGCTGGGCAGGCTTTCAAATCTTCATACACTTGATCTCTCTAATAACTTGTTCAATGGGGAAATTCCTCCCTCTCTCGGTCACTTGAGAAGTCTCCAATACTTGAGGCTCAACAATAACAGTCTTTCTGGAGGATGTCCAGAGCCGCTAGCTAACATGACTCAGCTTGCTTTTCTTGACCTGTCCTATAACAACCTCAGTGGCCCTATGCCCAGAATTTTGGCCAAATCATTCACCATTGTCGGAAACTCTCTTGCCTGTGGTACGGGGAAAGAGACAAAATGCCATGGCATGACGACATTGATGCCCATGTCCATGAACTTGAACACTACAGAGGATGCTATACCATCAGGTAAAACAAAATCAAACAAGATGGCCATTGCTTTTGGCTTAAGTCTAGGATGCCTTTGCTTGATAGTTCTTGGTTTTGGGCTATTCCTATGGTGGAGACACAATCATAACCAGCAGGCATTTTTTGATGTCAAAGACCGGTATCATGAAGAAGTATACCTTGGAAACCTGAAGAGGTTCCAATTCAGAGAACTCCAGATAGCTACACACAACTTCAGCAGCAAGAACATTCTGGGAAAGGGTGGCTTTGGAAATGTGTACAAAGGAGTGCTCTCCGATGGAACTCTTGTAGCAGTCAAGAGACTTAAAGATGGCAATGCCATAGGAGGAGAGATCCAATTTCAAACTGAAGTTGAAATGATTAGCTTGGCGGTGCACCGAAACCTCCTCAGACTCTACGGATTCTGTATGACACCAACCGAAAGGCTTCTGGTTTACCCTTACATGTCAAATGGCAGTGTTGCTTCCCGTCTCAAGGCTAAACCAGTGTTAGACTGGGGCACTAGGAAGCAAATTGCCTTGGGGGCAGCCAGGGGACTGTTATACCTTCATGAGCAGTGCGATCCAAAGATAATTCATAGGGATGTGAAAGCTGCAAACATATTGCTTGATGACTATTGTGAGGCAGTGGTTGGAGATTTTGGGTTGGCAAAGCTTTTGGATCACCAAGATTCACATGTTACAACTGCGGTGAGAGGCACTGTAGGGCATATTGCCCCTGAGTATCTCTCCACAGGGCAATCCTCTGAGAAAACTGATGTTTTTGGATTTGGCATTCTCCTTCTTGAACTGATCACAGGCCAGAGGGCTCTGGAATTTGGGAAGGCAGCAAACCAGAAAGGAGCCATGCTAGATTGGGTGAAGAAAATTCATCAGGAGAAGAAGCTAGAACTGTTCGTCGACAAGGATCTGAAGAACAGCTATGACATGATTGAGCTGGAAGAAATGGTTCAAGTGGCTCTCTTGTGTACTCAATACCTTCCCGGTCACAGGCCCAAAATGTCTGAAGTAGTAAGGATGCTTGAAGGAGATGGATTGGCAGAAAGATGGGAAGCTTCTCAAAGAGCTGATATGAGCAAGTGCAAGGCTCCTGAACTGTCTTCGTCTGATCGATATTCTGATCTCACTGATGACTCTTCCATGCAAGTCCAGGCCATGGAACTTTCAGGCCCGAGGTGA 1932 0.4513 MESPFSRTCVWFLGHYNCMGKLREAVLCFVALLWLWGSAANAVLSPKGVNFEVQALMGIKASLRDPHGVLDNWDVDAVDPCSWTMVTCSSDNLVIGLGSPSQSLSGTLSPSIGNLTNLQIVLLQNNNITGLIPSELGRLSNLHTLDLSNNLFNGEIPPSLGHLRSLQYLRLNNNSLSGGCPEPLANMTQLAFLDLSYNNLSGPMPRILAKSFTIVGNSLACGTGKETKCHGMTTLMPMSMNLNTTEDAIPSGKTKSNKMAIAFGLSLGCLCLIVLGFGLFLWWRHNHNQQAFFDVKDRYHEEVYLGNLKRFQFRELQIATHNFSSKNILGKGGFGNVYKGVLSDGTLVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKAKPVLDWGTRKQIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEFGKAANQKGAMLDWVKKIHQEKKLELFVDKDLKNSYDMIELEEMVQVALLCTQYLPGHRPKMSEVVRMLEGDGLAERWEASQRADMSKCKAPELSSSDRYSDLTDDSSMQVQAMELSGPR 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0883 643 SUPERFAMILY L domain-like 52 214 - -
Lele14g0883 643 FunFam Somatic embryogenesis receptor-like kinase 1 400 612 - -
Lele14g0883 643 ProSiteProfiles Protein kinase domain profile. 323 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g0883 643 SMART serkin_6 323 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g0883 643 Pfam Protein kinase domain 324 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g0883 643 SUPERFAMILY Protein kinase-like (PK-like) 299 593 IPR011009 -
Lele14g0883 643 FunFam Putative LRR receptor-like serine/threonine-protein kinase 49 231 - -
Lele14g0883 643 MobiDBLite consensus disorder prediction 605 643 - -
Lele14g0883 643 SMART LRR_typ_2 187 210 IPR003591 -
Lele14g0883 643 SMART LRR_typ_2 163 186 IPR003591 -
Lele14g0883 643 SMART LRR_typ_2 139 162 IPR003591 -
Lele14g0883 643 SMART LRR_typ_2 115 138 IPR003591 -
Lele14g0883 643 ProSitePatterns Protein kinases ATP-binding region signature. 329 351 IPR017441 GO:0005524
Lele14g0883 643 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 29 603 - -
Lele14g0883 643 MobiDBLite consensus disorder prediction 620 637 - -
Lele14g0883 643 FunFam Somatic embryogenesis receptor kinase 1 292 399 - -
Lele14g0883 643 Pfam Leucine rich repeat 116 176 IPR001611 GO:0005515
Lele14g0883 643 ProSitePatterns Serine/Threonine protein kinases active-site signature. 442 454 IPR008271 GO:0004672|GO:0006468
Lele14g0883 643 Gene3D Ribonuclease Inhibitor 49 231 IPR032675 -
Lele14g0883 643 Gene3D Phosphorylase Kinase; domain 1 292 399 - -
Lele14g0883 643 Pfam Leucine rich repeat N-terminal domain 52 89 IPR013210 -
Lele14g0883 643 Gene3D Transferase(Phosphotransferase) domain 1 400 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0883 Lele-ChrLele14 19423485 19426428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0883 19 643 Receptor kinase-like Gene Family AT5G16000 78.797 0.0 1005
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lele14g0883 Pkinase 1.4e-44 CL0016