Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0878 ATGGAGGAGGATGCGATTCAAGCACAAGCGTGTAAATTCGCTAGAGTTGGAAATGGCAGAAGCGAGTCCAACAAGATAGGTCCTAGAGGGGGCGAGAAATACCCAGACGGCGAAGAAAATGGAGGGCTGATGAGAAGAGGCGGAGTTGGCGACGTCAGCTCGAATCGCTTCCATGGCTGGCACCACAATTCTTCAAGAATCATTAGGGTTTCTCGAGCATCTGGAGGGAAAGATCGGCACAGCAAGGTCATGACTTCAAAGGGTTTAAGAGACAGAAGGGTTAGGCTCTCGGTAACCACGGCAATCCAGTTCTATGATCTTCAAGATCGGCTTGGCTATGACCAACCCAGTAAAGCAGTGGAGTGGCTAATCAAATCAGCTTCTGACGCCATTTCTGAGCTTCCGTCTCTGAACAACACATTCCCTGATACACCAAAGCAACCAAGCGATGAGAAAAGAGGGAGTGTCGGGACAGAACAAGGGTTTGATACAGCTGATGCAGAGGTAGATGGTGAGGGTGATTATCATCAGACTCAAAGTCAGAACCTTTCTTTGTCTAAGTCTGCTTGTAGCAGCACTTCCGAGACGAGCAAAGGCTCCGGCTTGTCCCTCTCAAGGTCTGATATTCGAGTAAACCGTGTGAAGGCCCGGGAGAGGGCAAGAGAGAGAGCAGCAAAAGAGAAGGAGAAAGAGAACACGGCACATCCCCACAATGGGAATAACCCCATTTCTCAAACTGCTTCTTTCACTGAGCTTCTCACCGGAGGGATTACTAGTACTGTTCCTTCCACCACGAGTCCCACCGTCGATGATCATCATGAGCCTAATTTGTTCAGCAAGGCAGCAAGACAGCAATGGTGTACAACACCCATGGACTACTTTAACTTAGGCCTTGTGGGGAATCCCTCCATTAGAGCTCATAATCATAATCAATCTTCAGGGTTCTCAGGACAGATCCAATTGGGGAACTCTTCCCTTCCCCTTCAGGCACTATCTGTTTCTCCATTCAATGTGGGGTGTGAAAATCACTCAGATCAGCTGCAGCATTTCTCATTCATGCCTGACCATAATCTCATACCCAGCGGAAGCAGCGACTACAACCTCAACTTCACCAGGGGGACCCTTCAGTCCAATTCACCGTCTGTTTTGCCTCACCCTCTTCAGAGGTTCTCTTCTGCTTTAGACGGATCCAATCTACCTTTCTTCATAGGAGCTGCTGCGCCAACCATGGAGAATCACCACCACCACCATCAGTTCTCGTCAACTGGATTTGATGGCCGTTTGCAACTATGTTATGGCGACCTAACCCGCCATTCTGACCACAAGGGTAAAGGCAAGAACTGA 1344 0.4903 MEEDAIQAQACKFARVGNGRSESNKIGPRGGEKYPDGEENGGLMRRGGVGDVSSNRFHGWHHNSSRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKSASDAISELPSLNNTFPDTPKQPSDEKRGSVGTEQGFDTADAEVDGEGDYHQTQSQNLSLSKSACSSTSETSKGSGLSLSRSDIRVNRVKARERARERAAKEKEKENTAHPHNGNNPISQTASFTELLTGGITSTVPSTTSPTVDDHHEPNLFSKAARQQWCTTPMDYFNLGLVGNPSIRAHNHNQSSGFSGQIQLGNSSLPLQALSVSPFNVGCENHSDQLQHFSFMPDHNLIPSGSSDYNLNFTRGTLQSNSPSVLPHPLQRFSSALDGSNLPFFIGAAAPTMENHHHHHQFSSTGFDGRLQLCYGDLTRHSDHKGKGKN 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0878 447 MobiDBLite consensus disorder prediction 174 207 - -
Lele14g0878 447 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 58 367 IPR005333 GO:0003700
Lele14g0878 447 ProSiteProfiles TCP domain profile. 76 134 IPR017887 -
Lele14g0878 447 MobiDBLite consensus disorder prediction 26 40 - -
Lele14g0878 447 MobiDBLite consensus disorder prediction 18 50 - -
Lele14g0878 447 ProSiteProfiles R domain profile. 210 228 IPR017888 -
Lele14g0878 447 MobiDBLite consensus disorder prediction 210 235 - -
Lele14g0878 447 Pfam TCP family transcription factor 75 230 IPR017887 -
Lele14g0878 447 MobiDBLite consensus disorder prediction 134 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0878 Lele-ChrLele14 19379647 19380990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0878 55 447 TCP Transcription Factor Family AT4G18390 43.256 1.51e-78 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lele14g0878 TCP 1.7e-42 No_clan