Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0868 ATGAGGCGGAATTGCAACTTGGAGCTTCAACTTTTTCCGTCCTTTGAGACCCGTCGTCTCCCTGAAACGTCGACGGAACAAGACAGTGAAAGCCCACAGGAAAATCTGCAGAAGCTCACCATTTTCTATGACGGGAAGATGTGTATTTGCGATGTCACCGAGTTTCAGGCTAGATCGATCTTGATGCTTGCAAATAGAGAAATGAAGGAAAGAGTAAGGATACCAAACGGGTCGGAGCCATCTTCACCAAACACAGCTCCGTTGTATAGCCCAAGTAGTGGTCTTTCTATGAAAAGATCTCTGCAAAATTTCCTTCAGAAGAGAAAGAATCGAATCCTTGAAGCTTCCCCGTACCATCACTAG 363 0.4545 MRRNCNLELQLFPSFETRRLPETSTEQDSESPQENLQKLTIFYDGKMCICDVTEFQARSILMLANREMKERVRIPNGSEPSSPNTAPLYSPSSGLSMKRSLQNFLQKRKNRILEASPYHH 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0868 120 MobiDBLite consensus disorder prediction 77 95 - -
Lele14g0868 120 Pfam tify domain 36 65 IPR010399 -
Lele14g0868 120 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 27 118 IPR040390 -
Lele14g0868 120 SMART tify_2 32 66 IPR010399 -
Lele14g0868 120 Pfam Jas motif 98 118 IPR018467 -
Lele14g0868 120 ProSiteProfiles Tify domain profile. 32 66 IPR010399 -
Lele14g0868 120 MobiDBLite consensus disorder prediction 71 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0868 Lele-ChrLele14 19323858 19325085 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0868 1 119 Tify Gene Family AT1G30135 47.244 1.71e-29 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lele14g0868 tify 4.7e-11 No_clan