Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0851 ATGAAACACTGGGACTCGTCCATTGTCTCCGAGTTTGGATCGCTAGCCATCACACACAAGAAGTCAAGGAGAAAGGTTAGAGAGCCAAAGGAGGAGAATGTTACTCTTGGCCCAACTGTAAGAGATGGTGAACATGTTTTCGGTGTAGCCCATATTTATGCATCATTTAACGACACTTTCATTCACGTGACTGATTTGTCTGGGAGAGAAACCCTTGTCCGCATCACTGGTGGAATGAAGGTTAAAGCTGACAGAGACGAGTCTTCCCCATATGCTGCTATGCTGGCTGCACAGGACGTATCTGCTAGATGCAAGGAACTTGGCATCACTGCTCTTCATATCAAGCTCCGTGCCACTGGTGGAAACAAGACAAAAACACCCGGTCCTGGTGCTCAGTCTGCTCTCCGTGCCCTTGCTCGTTCTGGAATGAAAATTGGTCGTATAGAGGATGTAACTCCAATTCCTTCTGATAGCACTCGCAGAAAGGGTGGTAGAAGAGGTAGGAGGCTTTAA 513 0.4756 MKHWDSSIVSEFGSLAITHKKSRRKVREPKEENVTLGPTVRDGEHVFGVAHIYASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSARCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRRGRRL 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0851 170 Hamap 30S ribosomal protein S11 [rpsK]. 20 167 IPR001971 GO:0003735|GO:0005840|GO:0006412
Lele14g0851 170 FunFam 40S ribosomal protein S14 20 170 - -
Lele14g0851 170 Gene3D Ribosomal protein S11 21 170 IPR036967 GO:0003735|GO:0005840|GO:0006412
Lele14g0851 170 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 23 165 IPR001971 GO:0003735|GO:0005840|GO:0006412
Lele14g0851 170 Pfam Ribosomal protein S11 48 166 IPR001971 GO:0003735|GO:0005840|GO:0006412
Lele14g0851 170 SUPERFAMILY Translational machinery components 43 168 - -
Lele14g0851 170 PIRSF RPS11p_RPS11a_RPS14e_RPS11o 15 167 IPR001971 GO:0003735|GO:0005840|GO:0006412
Lele14g0851 170 MobiDBLite consensus disorder prediction 150 170 - -
Lele14g0851 170 ProSitePatterns Ribosomal protein S11 signature. 135 157 IPR018102 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0851 Lele-ChrLele14 19163481 19165742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0851 22 159 Cytoplasmic Ribosomal Protein Gene Family AT3G52580 89.130 3.73e-91 260