Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0835 ATGGAGGAGGCTCTGCTCTCATATACCAGTCCCAGAAGGAAGCCTCCGCCACCACCGTCGCCGCTATGCCCTTTACCGGAGCACGACGAGGTTGTTGTTCCTCTTACCCCTTCGGCAATTAAGGACCGTCTTATCTTTGGACCTTCTTCCCCAACAGGTTCTTCCCCCTTGCTTGAGGCCTTAACACTTACCCTTAACTCCCCAAAACCCTCCTCTTCCTCACAGGACCCTCAAGATACACAACCCCAACAGTCTTGGCTTATTGATCCCAATTATCCAAGTCACAAAACTAATCTTCATCGCTCCAAAACTGCCCCAGCTATGGCGGTAATCAGCGATTTTCGTCACCATAGCCCTGTTGTTAGACCCCAATTCAGTTCCCAATCGATTGTTCGTCAAGCTGTTATTCTTCTCATAGTGTATTTGTTGTTGGGGGTGCTTATTTATTGGTTCAATCGTCATAATTTCTCAGCAACTGAGACTCATCCTGTTGTGGACGCTTTATATTTTTGTATAGTGACAATGTGTACAATAGGCTATGGTGATATTACTCCAAATAGTACAACAACAAAACTGTTTTCTGTATTGTTTGTGCTGGTGGGTTTTGGGTTTATTGACATACTGCTCAGTGGGATGGTCAGTTATGTTCTTGATTTGCAAGAGAGTCACTTGCTCCAAGCGGTGAAGACTAAGGTTGAAATTGAGAAGGATGCGAGATCATATATAATTGATGTGAAAAAAGGGAGAATGAGGATTAGGTTGAAGGTGTCGTTGGCGTTGGGGGTTGTCGTCCTTTGCATTGGGATTGGTTTTGGGGTTATGCATTTTGTGGAAGGGCTTGGGTTGTTGGATTCTTTTTATCTTTCAGTTATGTCAGTAACAACTGTTGGGTATGGTGACCATGCATTCAAGACATTGACTGGTCGCATCTTTGCTGCTATATGGTTGCTTGTATCGACGCTTGCAGTGGCTCGGGCATTCCTGTATTTGGCCGAGGCAAGAGTGGATAAGCGGCATAGGAGGATGGCGAAGTGGATTCTTGGTCAGGATATGACTATCTCTGAGTTTCTTGCTGCAGATATAGACAATAATGGCTTTGTGAGTAAATCAGAATATGTTATTTATAAGCTGAAGGAGATGGGGAAAGTTTCAGATAAAGACATTTTGCAGATTAGTGAGAAATTTGATAAGATAGATTCTGGCAACTGTGGAAAAATAACTCTGGCTGATCTTATGGAGGGTCAAAATTGA 1251 0.4357 MEEALLSYTSPRRKPPPPPSPLCPLPEHDEVVVPLTPSAIKDRLIFGPSSPTGSSPLLEALTLTLNSPKPSSSSQDPQDTQPQQSWLIDPNYPSHKTNLHRSKTAPAMAVISDFRHHSPVVRPQFSSQSIVRQAVILLIVYLLLGVLIYWFNRHNFSATETHPVVDALYFCIVTMCTIGYGDITPNSTTTKLFSVLFVLVGFGFIDILLSGMVSYVLDLQESHLLQAVKTKVEIEKDARSYIIDVKKGRMRIRLKVSLALGVVVLCIGIGFGVMHFVEGLGLLDSFYLSVMSVTTVGYGDHAFKTLTGRIFAAIWLLVSTLAVARAFLYLAEARVDKRHRRMAKWILGQDMTISEFLAADIDNNGFVSKSEYVIYKLKEMGKVSDKDILQISEKFDKIDSGNCGKITLADLMEGQN 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0835 416 SUPERFAMILY Voltage-gated potassium channels 246 353 - -
Lele14g0835 416 SUPERFAMILY Voltage-gated potassium channels 116 216 - -
Lele14g0835 416 ProSitePatterns EF-hand calcium-binding domain. 360 372 IPR018247 -
Lele14g0835 416 SUPERFAMILY EF-hand 354 413 IPR011992 -
Lele14g0835 416 MobiDBLite consensus disorder prediction 1 28 - -
Lele14g0835 416 MobiDBLite consensus disorder prediction 65 91 - -
Lele14g0835 416 Gene3D - 325 416 - -
Lele14g0835 416 FunFam Two-pore potassium channel 3 239 353 - -
Lele14g0835 416 Gene3D - 127 229 - -
Lele14g0835 416 PRINTS Two pore domain K+ channel signature 173 201 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lele14g0835 416 PRINTS Two pore domain K+ channel signature 294 303 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lele14g0835 416 Gene3D - 261 324 - -
Lele14g0835 416 FunFam Two-pore potassium channel 5 120 229 - -
Lele14g0835 416 Pfam Ion channel 136 216 IPR013099 -
Lele14g0835 416 Pfam Ion channel 262 331 IPR013099 -
Lele14g0835 416 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 135 390 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lele14g0835 416 MobiDBLite consensus disorder prediction 11 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0835 Lele-ChrLele14 19078098 19082019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0835 3 414 Ion Channels AT4G18160 63.510 1.19e-180 508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g0835 14 19078098 19082019 Lele16g1554 16 9013043 9020006 hybridization