Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0827 ATGATCTTGGGATGTAGGGTACCGCTGCGCTCTTGTGAGAAATCGAGTTATTTTGGTAGTTGCGGTCACTTGGTTTATGCCTTTATGAAGGGCGATGCAATGAAGCAGTCTTTTGACATTTCGGCTTCTGGTCCAACCAAGGTTCCATCTATAAATATTCCTAAAGAAATGGGACGCAATGCTTGGGAAGTTTTATCTGGATCTGATGCCTACCATGCCTCATCGGATGCTAGCCTTTTTTCTAGCTCATTACCTGTTTTGCCACATGAAAAGTTGAACTTGAACGACACTGAAACTGAGTATCAGTCTGTGGATGACGTCTCATCTGGCTTTAAAAAGCTCCAACAAGATTTAGAGGTTAATGAATCACTTGAAGATGCAAATATTCCTGCACTTGGAACAACACTTCCAGATGATGAGGATGAGCTTTTAGCTGGCGTAACGGATGATTTTGACCTGAATGGTTTGCCTGGTTCCCTGGAGGACTTGGAAGATTATGATCTTTTTGGTGGTGGAGGCATGGAACTGGAAAATGATCCCCAGGAAAGTCTTACAATGGGGATTTCAAAATTAAGTTTCTCTGATTGTACAATTGGCAATGGTTTGCCCCATTATTCTTTTCCTAATGCCGTTGGAACTGTTGCTGGGGAACATCCCTATGGGGAGCATCCTTCTCGAACATTATTTGTTCGAAATATTAACAGTAATGTGGAGGATTCAGAGTTGAGAGCCCTTTTTGAGCAATATGGTGATATTAGAACCCTCTATACTGCATGTAAACATCGGGGGTTTGTAATGATATCCTACTATGACATCCGTGCTGCTCGAACAGCTATGCGGGCATTACAAAACAAACCACTGCGACGGAGGAAACTTGACATTCATTTCTCAATACCAAAGGATAATCCATCAGACAAGGATATAAATCAAGGAACCTTGGTGGTTTTTAATTTGGATCCATCTGTTTCAAATGAAGACCTTCGACAAATATTTGGGGCTTATGGTGAAGTCAAAGAGATAAGGGAAACTCCTCACAAGAGGCATCATAAATTCGTTGAATTTTATGATGTCAGAGCTGCAGAAGCGGCACTTAAATCATTGAACAGGAGTGACATAGCGGGCAAACGAATAAAGCTGGAACCTAGTCGTCCTGGTGGAGCTCGTCGAAATTTGATGATCCAACTAAATCAAGATCTTGATCAAGACGAATCTTGGAATTTTCGACATCAAGTGGGTTCACCTGTAGCCAACTCTCCGCCAGGTAACTGGTTGCAGTTTAACAGTCCCATTGAACATAAGCCAATGCAATCTATCAGTAATTCTCCTGGTTCTAGGGTTATGAGCCCAACAACTGGCAACCATTTACCAGGATTAGCTTCAATCTTGCAACCTCAAGGATCTAACTCTATAAAGGGTGCAGCTATTGGTAAGGACCTAGGAAGGAGTAGTCATGGAGATCACATGTTTAGTAGTACCAATTCATCACATGGAGCCACATTTCAATCTCACTCGCTTCCAGAACCAACATTCGGCCAATATCGTGGAGCTTTGTCCTCTCTTGGCCCATCAACCTCAAATGGATCTTCTGTGGAAACCTTGTCTGGGCATCAGTTTCTTTGGGGAAATTCAAGCTTATACTCTGAGCACACCAAACCTTCACCCTGGCCTAGACCATCTGTAGCACCTCCATTCACATCAAATGGAAAGGGTCATGGCTTCCCATACTCTGGTCAGAATGGTTCCTTTGGATCTTCCCAGCATCATCTTCATCATCATGTAGGCTCTGCTCCATCACGTGTTCCATTTGAGAAGCGCTTTGGTTTTCTTCCTGAATCACCTGAAACCTCATTTATGAATCATGTTGGTTATGGAGGCTTAAATGTGGGACACAATGATGGAAACTACATGGTTAACATGGGTGGATCTGTTAATGCTGGCATTACTATACCGAGGAATATGTCTGAAAATGTTCAATCAAACTTTAGAATGAGATCTCCAAGGCTTAGCCCTGTGTTTTTGGGTAATGGTCCTTACTCTATGCTGCTACCCACTGCCCTGGATGGTTTGACTGACCGTGGAAGGAGTAGACGGCTAGAGAATAATGGTAACCAAATTGATAGCAAGAAGCAATTTGTGCTTGACTTGGATAAGATTAAAAGTGGTGAAGATGCAAGGACTACTTTAATGATAAAGAATATCCCAAATAAGTACACTTCAAAAATGTTACTAGCTGCCATTGACGAAAATCATAGGGGCACCTATGATTTCCTCTATCTGCCTATTGATTTTAAGAATAAGTGTAATGTGGGTTATGCATTTATCAACATGCTGTCACCCTCTCTTATAGTTCCATTCTACGAGACATTCAATGGAAAGAAGTGGGAGAAGTTTAATAGTGAGAAAGTTGCTTCTTTGGCATATGCTCGAATCCAAGGAAAGGCTGCCCTTGTGAGCCACTTCCAGAATTCAAGTTTGATGAATGAAGACAAGCGATGCCGTCCTATTCTTTTCCACTCAGAGGGTCCTGAAGCTGGTGATCAGATCGTTCAAGAACATCTTCCCTCCAAAAATCTCAATATCCAGGTCCTCAGGTCAAGCGATTCACATTTGAATGACTCTCCTGGAGGCCCCCAAAATGATAACCCTCCTTTGAACTTGGAGACATGTTAA 2670 0.4232 MILGCRVPLRSCEKSSYFGSCGHLVYAFMKGDAMKQSFDISASGPTKVPSINIPKEMGRNAWEVLSGSDAYHASSDASLFSSSLPVLPHEKLNLNDTETEYQSVDDVSSGFKKLQQDLEVNESLEDANIPALGTTLPDDEDELLAGVTDDFDLNGLPGSLEDLEDYDLFGGGGMELENDPQESLTMGISKLSFSDCTIGNGLPHYSFPNAVGTVAGEHPYGEHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSDKDINQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFVEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRNLMIQLNQDLDQDESWNFRHQVGSPVANSPPGNWLQFNSPIEHKPMQSISNSPGSRVMSPTTGNHLPGLASILQPQGSNSIKGAAIGKDLGRSSHGDHMFSSTNSSHGATFQSHSLPEPTFGQYRGALSSLGPSTSNGSSVETLSGHQFLWGNSSLYSEHTKPSPWPRPSVAPPFTSNGKGHGFPYSGQNGSFGSSQHHLHHHVGSAPSRVPFEKRFGFLPESPETSFMNHVGYGGLNVGHNDGNYMVNMGGSVNAGITIPRNMSENVQSNFRMRSPRLSPVFLGNGPYSMLLPTALDGLTDRGRSRRLENNGNQIDSKKQFVLDLDKIKSGEDARTTLMIKNIPNKYTSKMLLAAIDENHRGTYDFLYLPIDFKNKCNVGYAFINMLSPSLIVPFYETFNGKKWEKFNSEKVASLAYARIQGKAALVSHFQNSSLMNEDKRCRPILFHSEGPEAGDQIVQEHLPSKNLNIQVLRSSDSHLNDSPGGPQNDNPPLNLETC 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0827 889 MobiDBLite consensus disorder prediction 549 596 - -
Lele14g0827 889 PANTHER RNA RECOGNITION MOTIF-CONTAINING 78 873 - -
Lele14g0827 889 SUPERFAMILY RNA-binding domain, RBD 223 386 IPR035979 GO:0003676
Lele14g0827 889 FunFam Protein MEI2-like 1 310 405 - -
Lele14g0827 889 Gene3D - 311 404 IPR012677 -
Lele14g0827 889 Gene3D - 214 310 IPR012677 -
Lele14g0827 889 CDD RRM2_MEI2_like 310 380 - -
Lele14g0827 889 MobiDBLite consensus disorder prediction 571 588 - -
Lele14g0827 889 CDD RRM3_MEI2_like 728 813 IPR034454 -
Lele14g0827 889 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 226 299 IPR000504 GO:0003723
Lele14g0827 889 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 311 384 IPR000504 GO:0003723
Lele14g0827 889 FunFam MEI2-like protein 5 isoform 2 215 309 - -
Lele14g0827 889 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 313 378 IPR000504 GO:0003723
Lele14g0827 889 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 228 292 IPR000504 GO:0003723
Lele14g0827 889 MobiDBLite consensus disorder prediction 866 889 - -
Lele14g0827 889 SUPERFAMILY RNA-binding domain, RBD 727 812 IPR035979 GO:0003676
Lele14g0827 889 SMART rrm1_1 312 380 IPR000504 GO:0003723
Lele14g0827 889 SMART rrm1_1 727 803 IPR000504 GO:0003723
Lele14g0827 889 SMART rrm1_1 227 295 IPR000504 GO:0003723
Lele14g0827 889 Pfam RNA recognition motif 2 725 821 IPR007201 -
Lele14g0827 889 CDD RRM1_MEI2_like 225 301 IPR034453 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0827 Lele-ChrLele14 19017833 19023262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0827 221 419 Eukaryotic Initiation Factors Gene Family AT1G71770 24.889 2.96e-06 49.3