Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0793 ATGTTGACCAAAGAAAAGATCTGTTTAATAGGAGGAGCCAGGTCCATTGAATTCAGCAGCAGCCAGCCCCCACAGCTCAAACCTAAAACCGGAGAGGAAAATTCTGAACGCGCTTCATCGAGAGAGGATCCCAAAATTCCGAGGCAAAACGAAAGAAACTCGTTCTTCTCTGCGGCTTCCCACCTCCGTGACTGCGTATTTTCCGAGGTGGCACAAGCGCTGACGACTTTTCTGGGCAGTTCTAGCACCCTGCCTCCTTTCCTGGCAAAGACTTATGAGATGGTGGACGATCCTTCCACAGATTCGATTGTTTCCTGGAGTGCCTCTAACAAAAGTTTCATAGTATGGAATCCGCCAGAATTTGCAAGTGAGTTGCTACCAAGATTCTTTAAGCACAATAACTTCTCTAGTTTCATCAGACAGCTGAACACATATGGTTTTAGAAAAGTTGATCCAGAACAATGGGAATTTGCAAATGATGATTTTATAAGAGGTCAATCGCATCTTTTGAAGAATATACATAGACGAAAGCCAGTTCACAGCCATTCTTTACAGAATCTCCAAGGACAGGGAGCTTCTCTATTAACAGAACCAGAAAGACAGAGCTTAAAAGGCAAAATAGAGAGGCTGAAACATGAAAACGAACAACTTCGTCTAGAGTTAGAGAGACATGAACAGGGGTGGCAAGCAAGTGAAATTAAAATACGATGCTCAAAGGAGAGATTGGGAAAGTTGGAAAGGACACAACAAAAGATGGTCTCTTCTGTTTCTCAAGTGTTGAAGAAACCCGGAATTGCCTCCAATCTCTTGCAATTGTCAGAAACCCTGCATAGAAAACGAAGGTTGCCAAGAGTTGGTTACTTTTGTGATGAAGCTGTAATTGAAGATGCTACCGAATCTTCCTCAGTGATACCTCGAGATAATGCCGATATGACTTCTGTTCTGTCATCAAATGTGGAGCGACGGGAACAGTTGGAATCATTGCTGTTATTCTGGGAGAACATTACTCATGATTTTAGTGATTCCTTTGCTCATAGCCATTCAAATATGGATCTTGATGAATCTACAAGTTGTGCTGATAGTCCTTCTCTCTCTTGTATGCAACTTGATGACGAAGTTCACCCCATGTCATCTGGAATTGACATGAACTCTGAGCCAGCTGGAGCTACTGTTTCTGATCCTGGTTCATTAAAAGAAAAACCTGTGGGAACAACCACTGTAGCATCTGGCGTCAATGATGTATTCTGGGAACAGTTCTTAACAGAGAATCCTGGGTCTTCAGAAACACATGAAGTACAGTCAGAACAAAAGAATTCTGATAGCAGAAAGAATGAAGGAAAGCCTGGTGACCGGAGTAAACTTTGGTGGAGCATGAACAATGTAAATAGCCTTTCAGAACAGATGGGGCATCTTAGCCAAACAGAGAAAACTTAA 1434 0.4247 MLTKEKICLIGGARSIEFSSSQPPQLKPKTGEENSERASSREDPKIPRQNERNSFFSAASHLRDCVFSEVAQALTTFLGSSSTLPPFLAKTYEMVDDPSTDSIVSWSASNKSFIVWNPPEFASELLPRFFKHNNFSSFIRQLNTYGFRKVDPEQWEFANDDFIRGQSHLLKNIHRRKPVHSHSLQNLQGQGASLLTEPERQSLKGKIERLKHENEQLRLELERHEQGWQASEIKIRCSKERLGKLERTQQKMVSSVSQVLKKPGIASNLLQLSETLHRKRRLPRVGYFCDEAVIEDATESSSVIPRDNADMTSVLSSNVERREQLESLLLFWENITHDFSDSFAHSHSNMDLDESTSCADSPSLSCMQLDDEVHPMSSGIDMNSEPAGATVSDPGSLKEKPVGTTTVASGVNDVFWEQFLTENPGSSETHEVQSEQKNSDSRKNEGKPGDRSKLWWSMNNVNSLSEQMGHLSQTEKT 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0793 477 MobiDBLite consensus disorder prediction 455 477 - -
Lele14g0793 477 FunFam Heat shock transcription factor 1 80 177 - -
Lele14g0793 477 Gene3D - 80 177 IPR036388 -
Lele14g0793 477 MobiDBLite consensus disorder prediction 422 477 - -
Lele14g0793 477 MobiDBLite consensus disorder prediction 376 403 - -
Lele14g0793 477 PRINTS Heat shock factor (HSF) domain signature 87 110 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele14g0793 477 PRINTS Heat shock factor (HSF) domain signature 138 150 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele14g0793 477 PRINTS Heat shock factor (HSF) domain signature 125 137 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele14g0793 477 Pfam HSF-type DNA-binding 87 176 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele14g0793 477 SUPERFAMILY "Winged helix" DNA-binding domain 83 176 IPR036390 -
Lele14g0793 477 Coils Coil 200 227 - -
Lele14g0793 477 MobiDBLite consensus disorder prediction 30 49 - -
Lele14g0793 477 MobiDBLite consensus disorder prediction 433 450 - -
Lele14g0793 477 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 81 410 IPR027725 -
Lele14g0793 477 MobiDBLite consensus disorder prediction 16 50 - -
Lele14g0793 477 SMART hsfneu3 83 176 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele14g0793 477 ProSitePatterns HSF-type DNA-binding domain signature. 126 150 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0793 Lele-ChrLele14 18790414 18793817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0793 80 477 HSF AT4G18880 51.724 1.61e-121 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lele14g0793 HSF_DNA-bind 8.6e-32 CL0123