Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0781 ATGAAAACACCGAGTATCGAAAACAAGGGGAGGTCGTCGAATAAGTCATCGTCCAGAGGCCACCACAGGTTCGTCGGTGTCCGTCAGAGACCGTCGGGAAGATGGGTGGCCGAGATCAAAGACTCGCTTCAGAAGGTCAGGCTATGGCTCGGAACTTTCGACACTGCAGAAGATGCCGCACGAGCCTATGACACGGCCGCTCGCTCCCTGCGTGGCGCAAATGCTCGCACCAACTTTGAACTGCCGTATCAATCCTCAGCCTCCAGCGGTGGCGGCGGTTTTAGGTTCGCTCCGGAGAACATGGAGCCCTTCTCCTTCGAGGATGTGCCTGGGGCTGGTCCTGATTCAGATGGACTTCTCGGTGCTATCAGAGCCAAACTTTCTGATGATAAGACAAAGGCATCATCGAAGCCTACCTCTATTATTGGGTCTAGCGTGACCTCGATCTGCTCATCAAGTACGCGTAACCATTCTGGGAACACAGAAATATCAATACCCTCAAAACCACCCAAAGCTAAGAGAGTGATTGTTTCAGAACCTGTATTAGATCCTGGAACGACGACGACCATGAGGAGCATGATGAGCTTGGGCTGGTCTTCATCCAACGACGCCGCATATGGACTGCCATGGCAGTCCTCACAGACGACGAATCAGGGCCCTGAAAGTGGCTTGCTTGCCGATGCTGTTGGTGGAACCACAGCGGCTTCGTGGCCTTTTTCTGAGGTGGGCCAGCCGGAGTCCACCTTTGACCTGACATGTTCAGATCATGGTTTATCCAACAGTGATAAGAGTGGTCAAACGAATCTGGTGAGCTTAGAGGAGATGAATCAAATAGGTGGAACATCGTCCGAGTGCTTCTGGACGACACCTGAGCAACAACAGTTCGTGTACTGTGATAACAACAGTTGGTTTATTAGTTCCGGTGGCTCTTGGGATCTTCCGAGCTTGGTTGATTAA 957 0.5193 MKTPSIENKGRSSNKSSSRGHHRFVGVRQRPSGRWVAEIKDSLQKVRLWLGTFDTAEDAARAYDTAARSLRGANARTNFELPYQSSASSGGGGFRFAPENMEPFSFEDVPGAGPDSDGLLGAIRAKLSDDKTKASSKPTSIIGSSVTSICSSSTRNHSGNTEISIPSKPPKAKRVIVSEPVLDPGTTTTMRSMMSLGWSSSNDAAYGLPWQSSQTTNQGPESGLLADAVGGTTAASWPFSEVGQPESTFDLTCSDHGLSNSDKSGQTNLVSLEEMNQIGGTSSECFWTTPEQQQFVYCDNNSWFISSGGSWDLPSLVD 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0781 318 MobiDBLite consensus disorder prediction 1 29 - -
Lele14g0781 318 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 12 217 - -
Lele14g0781 318 SUPERFAMILY DNA-binding domain 24 81 IPR016177 GO:0003677
Lele14g0781 318 PRINTS Ethylene responsive element binding protein signature 24 35 IPR001471 GO:0003700|GO:0006355
Lele14g0781 318 PRINTS Ethylene responsive element binding protein signature 46 62 IPR001471 GO:0003700|GO:0006355
Lele14g0781 318 Pfam AP2 domain 23 72 IPR001471 GO:0003700|GO:0006355
Lele14g0781 318 Gene3D AP2/ERF domain 22 81 IPR036955 GO:0003700|GO:0006355
Lele14g0781 318 SMART rav1_2 23 86 IPR001471 GO:0003700|GO:0006355
Lele14g0781 318 MobiDBLite consensus disorder prediction 129 172 - -
Lele14g0781 318 FunFam ethylene-responsive transcription factor RAP2-11 22 81 - -
Lele14g0781 318 ProSiteProfiles AP2/ERF domain profile. 23 80 IPR001471 GO:0003700|GO:0006355
Lele14g0781 318 MobiDBLite consensus disorder prediction 134 165 - -
Lele14g0781 318 CDD AP2 23 80 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0781 Lele-ChrLele14 18714809 18715765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0781 11 79 AP2-EREBP Transcription Factor Family AT5G19790 67.143 2.79e-26 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele14g0781 AP2 6.8e-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g0781 14 18714809 18715765 Lele16g1622 16 9415696 9416652 hybridization