Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele14g0773 | ATGGATCAGGCAAGTAAGCCAGAAAGTGATGAGACGTCGGATCTCGTTGATGAAGGAACGGGAAAGAAAACAAGTCGTTCGGTTGAAGGGTCTGCTGATGCAGTAGCTGGGGGCAGCTTGAGTGGAGCTATCCTAAGTGGAGATGTGACTTCTGAAGAGATGAGTAATGATCCGGGATTGAATAAGAAACTACATGAGGCGCCTGCAGAAGCTATTGATCAGGGCGTGCGTGATCAGCAAAATACCAGTGACACATTCCACGTAGTTGATCAAGGAACAAGTTATAATTCAAGGAATTTGCATAATAGTGCTGTACTTGAGACCGTAGTTGTAATAGATTCTGCTGACACAGAGTGTGTGAATGGAGATAATAGGAAGTCTGAAGCGAAGGTCAATGAATCGGGGTTGAACAAGGCATCCATGAAATCACCAAAAAGGCCGTCTGAAGCGGATAAAAATTCATGCGTGATCAATATGGAGTCTGGTAGCTGCAGAGAGTTTAGCGAGAATGTGGAGGGTGAAAGGATTTGTAGGATTTGCCATCTGACTTCTGGGCAACCATCAGATTCAGCTGCTGCTAGCCCTACAAACAGTGCTTCTACTGGAGATTTAATTCAGCTTGGTTGTGCGTGTAAAGATGAGTTGGGTATTGCGCACAGTCATTGTGCTGAGGCATGGTTCAAGCTAAGAGGAAACAGATTGTGTGAAATATGTGGTGAAAGTGCCAAAAATGTTTCGGGTGTTGCTGATCATGGATTTATTGAAGAGTGGAATGAAAGAACATTAATCGACAACCATAGCACCTCATCTGGCATCTGTTGTGGATGCTGGCGTGGACAGCCATTTTGTAACTTCTTGATGGCATGCCTGGTAATAGCTTTTGTTCTGCCATGGTTTTTCCGTGTAAATATGTTCTGA | 918 | 0.4423 | MDQASKPESDETSDLVDEGTGKKTSRSVEGSADAVAGGSLSGAILSGDVTSEEMSNDPGLNKKLHEAPAEAIDQGVRDQQNTSDTFHVVDQGTSYNSRNLHNSAVLETVVVIDSADTECVNGDNRKSEAKVNESGLNKASMKSPKRPSEADKNSCVINMESGSCREFSENVEGERICRICHLTSGQPSDSAAASPTNSASTGDLIQLGCACKDELGIAHSHCAEAWFKLRGNRLCEICGESAKNVSGVADHGFIEEWNERTLIDNHSTSSGICCGCWRGQPFCNFLMACLVIAFVLPWFFRVNMF | 305 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele14g0773 | 305 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Lele14g0773 | 305 | MobiDBLite | consensus disorder prediction | 1 | 62 | - | - | |
Lele14g0773 | 305 | MobiDBLite | consensus disorder prediction | 121 | 152 | - | - | |
Lele14g0773 | 305 | ProSiteProfiles | Zinc finger RING-CH-type profile. | 169 | 245 | IPR011016 | GO:0008270 | |
Lele14g0773 | 305 | SMART | ringv_2 | 176 | 239 | IPR011016 | GO:0008270 | |
Lele14g0773 | 305 | PANTHER | ZINC FINGER, RING-CH-TYPE | 63 | 305 | - | - | |
Lele14g0773 | 305 | SUPERFAMILY | RING/U-box | 173 | 241 | - | - | |
Lele14g0773 | 305 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 147 | 249 | IPR013083 | - | |
Lele14g0773 | 305 | Pfam | RING-variant domain | 177 | 238 | IPR011016 | GO:0008270 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele14g0773 | Lele-ChrLele14 | 18677905 | 18681145 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele14g0773 | 106 | 304 | C3H Transcription Factor Family | AT5G05830 | 36.232 | 2.20e-30 | 112 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele14g0773 | 14 | 18677905 | 18681145 | Lele14g0773 | 14 | 18677905 | 18681145 | ECH | |
Lele14g0773 | 14 | 18677905 | 18681145 | Lele15g1602 | 15 | 9495085 | 9498422 | hybridization | |
Lele14g0773 | 14 | 18677905 | 18681145 | Lele16g1632 | 16 | 9458192 | 9461887 | hybridization |