Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0773 ATGGATCAGGCAAGTAAGCCAGAAAGTGATGAGACGTCGGATCTCGTTGATGAAGGAACGGGAAAGAAAACAAGTCGTTCGGTTGAAGGGTCTGCTGATGCAGTAGCTGGGGGCAGCTTGAGTGGAGCTATCCTAAGTGGAGATGTGACTTCTGAAGAGATGAGTAATGATCCGGGATTGAATAAGAAACTACATGAGGCGCCTGCAGAAGCTATTGATCAGGGCGTGCGTGATCAGCAAAATACCAGTGACACATTCCACGTAGTTGATCAAGGAACAAGTTATAATTCAAGGAATTTGCATAATAGTGCTGTACTTGAGACCGTAGTTGTAATAGATTCTGCTGACACAGAGTGTGTGAATGGAGATAATAGGAAGTCTGAAGCGAAGGTCAATGAATCGGGGTTGAACAAGGCATCCATGAAATCACCAAAAAGGCCGTCTGAAGCGGATAAAAATTCATGCGTGATCAATATGGAGTCTGGTAGCTGCAGAGAGTTTAGCGAGAATGTGGAGGGTGAAAGGATTTGTAGGATTTGCCATCTGACTTCTGGGCAACCATCAGATTCAGCTGCTGCTAGCCCTACAAACAGTGCTTCTACTGGAGATTTAATTCAGCTTGGTTGTGCGTGTAAAGATGAGTTGGGTATTGCGCACAGTCATTGTGCTGAGGCATGGTTCAAGCTAAGAGGAAACAGATTGTGTGAAATATGTGGTGAAAGTGCCAAAAATGTTTCGGGTGTTGCTGATCATGGATTTATTGAAGAGTGGAATGAAAGAACATTAATCGACAACCATAGCACCTCATCTGGCATCTGTTGTGGATGCTGGCGTGGACAGCCATTTTGTAACTTCTTGATGGCATGCCTGGTAATAGCTTTTGTTCTGCCATGGTTTTTCCGTGTAAATATGTTCTGA 918 0.4423 MDQASKPESDETSDLVDEGTGKKTSRSVEGSADAVAGGSLSGAILSGDVTSEEMSNDPGLNKKLHEAPAEAIDQGVRDQQNTSDTFHVVDQGTSYNSRNLHNSAVLETVVVIDSADTECVNGDNRKSEAKVNESGLNKASMKSPKRPSEADKNSCVINMESGSCREFSENVEGERICRICHLTSGQPSDSAAASPTNSASTGDLIQLGCACKDELGIAHSHCAEAWFKLRGNRLCEICGESAKNVSGVADHGFIEEWNERTLIDNHSTSSGICCGCWRGQPFCNFLMACLVIAFVLPWFFRVNMF 305
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0773 305 MobiDBLite consensus disorder prediction 1 24 - -
Lele14g0773 305 MobiDBLite consensus disorder prediction 1 62 - -
Lele14g0773 305 MobiDBLite consensus disorder prediction 121 152 - -
Lele14g0773 305 ProSiteProfiles Zinc finger RING-CH-type profile. 169 245 IPR011016 GO:0008270
Lele14g0773 305 SMART ringv_2 176 239 IPR011016 GO:0008270
Lele14g0773 305 PANTHER ZINC FINGER, RING-CH-TYPE 63 305 - -
Lele14g0773 305 SUPERFAMILY RING/U-box 173 241 - -
Lele14g0773 305 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 147 249 IPR013083 -
Lele14g0773 305 Pfam RING-variant domain 177 238 IPR011016 GO:0008270
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele14g0773 Lele-ChrLele14 18677905 18681145 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0773 106 304 C3H Transcription Factor Family AT5G05830 36.232 2.20e-30 112
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g0773 14 18677905 18681145 Lele14g0773 14 18677905 18681145 ECH
Lele14g0773 14 18677905 18681145 Lele15g1602 15 9495085 9498422 hybridization
Lele14g0773 14 18677905 18681145 Lele16g1632 16 9458192 9461887 hybridization