Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0772 ATGGCTGTTTGTTTCTTCTTGTTTCCGTGGAATTGGTTGGCTGCTGCTGGTAACACTGACAGTCTTCTTTCTCCAAAGGGTGTGAACTATGAAGACGAATTGCGTGTTATGGATGGTTGGGATATTATTTCGGTTGATCCTTGTACTTGGAACATGGTCGGTTGCTCTGCTGAGGGCTCTGTTATTTCCCTGAATAGAAAAATAATGAAGAAGGACAATAAGCTTTCATTAATCAATAATTTAGCTCCCCCAATTTACTGTTGGTTGTTGCAGAACAATCAGTTATCCGGACCTGTTCCTGCTGAGATAGGAAAGCTTTTGGAGCTTCGGACTCTGGATCTTTCTGGTAAACAGTTTGTTGGTGAAATCCCTACTTCTCTGGGCTTTTTGACCCGTCTTAGTTGCTTGCGGCTCAGTAGAAATAAACTATCTGGGCAGATTCCTCAATTCGTTGCAAATCTCACAGGTTTCATTCTTGTATGTGCTCTTCTAAAGTTGCATTATATTTTCCCTCATCAATTCTCTAAGATTGATAAGAGTATTATGCTTTCTAGGGACTTGTCATTCAATAATCCCAGTGGTTCCATTCCAAAAATTTTAGCAAAAGGTTACAGGAAACAACTTCCTTTGCGCATCTTCATCAGCACAAATTTTTTACTTGCAGAAACTGATTCGTCACTGGAAGTTGGTAGTCATCACCATCTGGTGCTTTCGATTGCTATTGGCATTAGTTGTACATTTCTAATTTCAGTAATGCTGCTTATCTGCTGTGTGCATTGGTACAGATCGCGCATCCTGTATACTTCTTATGTAAAGGAAGATTATGAATTTGACATTGGTCATTTGAGGAGGTTTTCATTCCGTGAATTGCAATATGCTACTAGCAATTTCAGTCCAAAACACATCCTAGGACAAGGTGAATTTGGTGTTGTCTACAAACGATGCCTTCCAAATAAAATGACGGTGGCGGTGAAGAGGCTGAAAGATCCCAATTACACCGGAGAAGTACAATTTCAAACTGATGAGATGATTGGCTTGGCAGTTCATCGGAATCTCTTACGTCTCTATGGATTTTGTATGACATCTGATGAGTGGCTACTTGTTTACCCATACATGCCTAATGACAGTGTTGCTGATCGCTTGAGAGGCAGGAAGGCTTTGGATGCTGGAAATGGCCAAATCCAGAAGGGAATGATTCTTGATTCGGTCAAAACCTTATTTGGGGAGAAGCGATTAGAAGTGCTAGTTGATAGGGATCTGAGGGGACGTTTTAATCCAATCAAGTTGGAACAAGCAGTGAAGTTGTCTCTCCGGCCAAAGATTTCGGAAATCTTGAGGATCCTGGAAGGCGTAGTCGGACAAAGGGCAGCCGGAGGAGGAGTCACAATGTGGAGGTATTCTTTATGA 1407 0.4158 MAVCFFLFPWNWLAAAGNTDSLLSPKGVNYEDELRVMDGWDIISVDPCTWNMVGCSAEGSVISLNRKIMKKDNKLSLINNLAPPIYCWLLQNNQLSGPVPAEIGKLLELRTLDLSGKQFVGEIPTSLGFLTRLSCLRLSRNKLSGQIPQFVANLTGFILVCALLKLHYIFPHQFSKIDKSIMLSRDLSFNNPSGSIPKILAKGYRKQLPLRIFISTNFLLAETDSSLEVGSHHHLVLSIAIGISCTFLISVMLLICCVHWYRSRILYTSYVKEDYEFDIGHLRRFSFRELQYATSNFSPKHILGQGEFGVVYKRCLPNKMTVAVKRLKDPNYTGEVQFQTDEMIGLAVHRNLLRLYGFCMTSDEWLLVYPYMPNDSVADRLRGRKALDAGNGQIQKGMILDSVKTLFGEKRLEVLVDRDLRGRFNPIKLEQAVKLSLRPKISEILRILEGVVGQRAAGGGVTMWRYSL 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0772 468 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 17 392 - -
Lele14g0772 468 FunFam Somatic embryogenesis receptor kinase 1 267 371 - -
Lele14g0772 468 SMART tyrkin_6 297 448 IPR020635 GO:0004713|GO:0006468
Lele14g0772 468 Gene3D Phosphorylase Kinase; domain 1 267 371 - -
Lele14g0772 468 Pfam Protein kinase domain 300 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g0772 468 ProSiteProfiles Protein kinase domain profile. 297 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g0772 468 SUPERFAMILY Protein kinase-like (PK-like) 272 385 IPR011009 -
Lele14g0772 468 Gene3D Ribonuclease Inhibitor 18 208 IPR032675 -
Lele14g0772 468 SUPERFAMILY L domain-like 37 200 - -
Lele14g0772 468 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 84 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0772 Lele-ChrLele14 18670117 18673518 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0772 377 458 Receptor kinase-like Gene Family AT5G45780 43.956 1.73e-16 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lele14g0772 Pkinase 1.8e-10 CL0016