Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0760 ATGGAAGACAGTGTTCGTCAAGATCTTGTGAAGCTTGAATTACTCCCTAATCCACAATTGATTGACAATCATACACCTCATCAGACAGATGAAATTTGTTGCATGAATAGAAAACTTGGACACTGCGTGTGGCTGGGTAATTTCAAAGCATGGAACATGAGGCAATCTCTTGTCATTCCAATTAAAGGAGAAATTACAAAATACCTCAATTTCTTGACACTGCCATTGTCCAAGCTACAGAAGTACTATAATTATGAAGAGAATTGCTTTGACAATCAGCCTAGTGAGTCAGCTATTGCTCAAATGCATCGTAAATTACTTGATCAGTATAATAACCTTGTAGCTGTACCTTTTAGCGGTGGGTCTACCATAAAACAGATCATTAGTCTCCCAACTACACTGAGTAGTGGAGCTTTTCGAGCTACATTAAATACATGTAAGAATCAAAATCAGTCACCTGCACCGTTGCCTTCACTTGCTTCTTCTGGAAGTGAAACAAATCAACAACCTTCAGCTAAAGATGAGGCTTCTGGAGATGCTTGGAAGTACATAATTATTATATTAGGGGTACTTGTGTTGGTCATTGTTACTATTGTCATATTTTGCCTGTGGCATAAGAAAGCAGTAAAAGCAATTAGGCCATGGAAGACGGGATTAAGTGGACAGTTACAAAAAACTTTTGTGACAGGTGTCCCTAAGCTAGATCGGGCAGAGTTGGATGTAGCTTGTGAGGATTTCAGCAATATTGTTATAAGTTTGCCTTATTGCAGTACATACAAGGGAACCCTTTCCAGTGGAGTCGAGATTGCTGTTACATCTACTCTGATTACTTCTGCCCAAGAATGGTCAAAGAATATGGAGATTGCCTATCAAGAAAAGATTGATTCCTTGTCTCGGATAAATCATAAGAACTTTATCAATATTATCGGTTACTGTGAGGAAGAAGAGCCATTTACTAGGATGATGGTGACTGAGTATGCTCCAAATGGATCTCTATTTGAGCATTTGCATGGTAATATTCTTTCTCTTAGTGATTTTGTTGTTGAGGGGCTTGAACACGTTGATTGGAATGCGAGGATGAGGGTTATTATGGGCGTGGCTTATTGTCTTCAATACATGCACCATGACCTGAATCCACCAATAGCTCATGCTAGACTCAATTCACAATTAGTCTTGTTAACAGATGATTTTGCAGCGAAGCTCATGTTTACCCCATCAACTGAAGATAAATCAAATTCAAAGAATTCTGAATTGCCATTAGATGCTGAATTTGAGACGAATGTTTATTGCTTTGGAAAATTGTTATTCGAAATCATTTCTGGGAAATTACCAGACTGTGAAGAACAAGGACAACTTGAGAAATGGGCTGCTGAATTTTCAAATGGTAAGAGAAGCATCAGTTGCATGATCGATCCTTCCCTTGAATCCTTCAAAGAGAAAGAACTTGAAGTGATTTGTGAGGTGATCCATGAATGCACTCAACCTAATCCGAGTTTGAGACCCACAATGAAGGACATAACCTCCAAATCAAGGAATGCTATCAATATATCACCTGACTCTCCACTCTGGTGGGCCGAAATAGAGATCTTGTCAGAAGAGACAACATAA 1608 0.3887 MEDSVRQDLVKLELLPNPQLIDNHTPHQTDEICCMNRKLGHCVWLGNFKAWNMRQSLVIPIKGEITKYLNFLTLPLSKLQKYYNYEENCFDNQPSESAIAQMHRKLLDQYNNLVAVPFSGGSTIKQIISLPTTLSSGAFRATLNTCKNQNQSPAPLPSLASSGSETNQQPSAKDEASGDAWKYIIIILGVLVLVIVTIVIFCLWHKKAVKAIRPWKTGLSGQLQKTFVTGVPKLDRAELDVACEDFSNIVISLPYCSTYKGTLSSGVEIAVTSTLITSAQEWSKNMEIAYQEKIDSLSRINHKNFINIIGYCEEEEPFTRMMVTEYAPNGSLFEHLHGNILSLSDFVVEGLEHVDWNARMRVIMGVAYCLQYMHHDLNPPIAHARLNSQLVLLTDDFAAKLMFTPSTEDKSNSKNSELPLDAEFETNVYCFGKLLFEIISGKLPDCEEQGQLEKWAAEFSNGKRSISCMIDPSLESFKEKELEVICEVIHECTQPNPSLRPTMKDITSKSRNAINISPDSPLWWAEIEILSEETT 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0760 535 SUPERFAMILY Protein kinase-like (PK-like) 256 507 IPR011009 -
Lele14g0760 535 MobiDBLite consensus disorder prediction 147 173 - -
Lele14g0760 535 Gene3D Transferase(Phosphotransferase) domain 1 417 519 - -
Lele14g0760 535 Gene3D Transferase(Phosphotransferase) domain 1 327 416 - -
Lele14g0760 535 FunFam Inactive receptor-like serine/threonine-protein kinase 218 326 - -
Lele14g0760 535 Pfam Protein tyrosine and serine/threonine kinase 279 508 IPR001245 GO:0004672|GO:0006468
Lele14g0760 535 Gene3D Phosphorylase Kinase; domain 1 215 326 - -
Lele14g0760 535 PANTHER PROTEIN MALE DISCOVERER 2 71 532 - -
Lele14g0760 535 SMART tyrkin_6 249 514 IPR020635 GO:0004713|GO:0006468
Lele14g0760 535 ProSiteProfiles Protein kinase domain profile. 209 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0760 Lele-ChrLele14 18594516 18599386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0760 192 508 Receptor kinase-like Gene Family AT5G56040 29.023 1.43e-30 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Lele14g0760 PK_Tyr_Ser-Thr 7.1e-13 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0862 13 20203973 20209121 Lele14g0760 14 18594516 18599386 ECH
Lele14g0760 14 18594516 18599386 Lele14g0760 14 18594516 18599386 ECH
Lele14g0760 14 18594516 18599386 Lele15g1615 15 9589275 9596146 hybridization
Lele14g0760 14 18594516 18599386 Lele16g1645 16 9542608 9549558 hybridization