Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0759 ATGTCGTCATCAGAAGGAATATTTCAGATCGATGACAAGAAGAACAGCAGGTGTACAGGGGAAACTTCATTGGGATCTTCTCAGACATGCTCATCCTTTGACTTGAATGAAGGAGCAAGCATAGAAGAAGACAACAACGGAACAGACTATGATATCATGGCTGAGGAGAATGATGATGATGGTGATGAAGAGAAAGCAAGGGATAATAATGAAGAAAGTGTTTCAACTAACAGAAGCACTAACGAAAGAAGAAGAACGGTGAGACAGTATGTTAGATCAAAGATGCCTCGCCTTCGATGGACTCCTGAACTTCATCTCTCCTTTGTTCAAGCTGTTGAAAGGCTTGGGGGTCAAGAGAGAGCCACTCCCAAGTTGGTGCTTCAGCTAATGAATGTGAGAGGCCTTAGCATTGCTCATGTCAAGAGTCACTTGCAGATGTATCGAAGCAAGAAACTTGATGATGCCGGGCAAGTTGTCGGTGGAACACACAAATCCACCCAAACGGAAGGTCTTGGGCCGAGACCTCATCAATATCTGAAGATGGGAAACGGTGGAATCATCCTCGCAAGTAATCGCAGCGACCAAACTAGTCTCTTTCTGCCCTCCTTCTTCGCCCCATCACCTGCACATACTACAAATCCTACTCATTCATGGTACCTGAATGAAGCGATGCTGCGGCAAGAAAAGCGATGGCTGCCTGATCTGCAATTGGGGCTTAGTCTGGGAGGTGGCAAAGACACCCAAGAAATTAGCACTGAGCTTTCACTTTCCTAG 774 0.4599 MSSSEGIFQIDDKKNSRCTGETSLGSSQTCSSFDLNEGASIEEDNNGTDYDIMAEENDDDGDEEKARDNNEESVSTNRSTNERRRTVRQYVRSKMPRLRWTPELHLSFVQAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDDAGQVVGGTHKSTQTEGLGPRPHQYLKMGNGGIILASNRSDQTSLFLPSFFAPSPAHTTNPTHSWYLNEAMLRQEKRWLPDLQLGLSLGGGKDTQEISTELSLS 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0759 257 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 96 151 IPR006447 GO:0003677
Lele14g0759 257 SUPERFAMILY Homeodomain-like 94 150 IPR009057 -
Lele14g0759 257 FunFam Myb family transcription factor 94 152 - -
Lele14g0759 257 MobiDBLite consensus disorder prediction 1 87 - -
Lele14g0759 257 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 73 174 - -
Lele14g0759 257 MobiDBLite consensus disorder prediction 48 66 - -
Lele14g0759 257 MobiDBLite consensus disorder prediction 67 87 - -
Lele14g0759 257 MobiDBLite consensus disorder prediction 19 43 - -
Lele14g0759 257 Pfam Myb-like DNA-binding domain 98 148 IPR001005 -
Lele14g0759 257 Gene3D - 95 152 - -
Lele14g0759 257 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 92 152 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0759 Lele-ChrLele14 18582119 18585908 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0759 87 171 G2-like Transcription Factor Family AT2G42660 69.412 1.12e-35 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele14g0759 Myb_DNA-binding 4.5e-08 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g0759 14 18582119 18585908 Lele14g0759 14 18582119 18585908 ECH
Lele13g0861 13 20195647 20197840 Lele14g0759 14 18582119 18585908 ECH
Lele14g0759 14 18582119 18585908 Lele15g1616 15 9604067 9606255 hybridization
Lele14g0759 14 18582119 18585908 Lele16g1646 16 9554918 9561289 hybridization