Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0752 ATGGGGGATTCGCGCGACTTTCTCACGCCGCCTGTGAACCATTCTCGCCCCATGCCCGTCCGCGAAGATTGTTGGAGCGAGGAAGCTACCTCCACCCTCGTCGACGCTTGGGGCCGCCGTTATATACAGCTTAACCGCGGCAACCTCCGCCAGAAGGACTGGCAGGACGTGGCCGACGCTGTAAACGCTCTACATGGTCATACCAAGAAGACGCATCGGACGGATGTTCAGTGCAAGAACCGCATCGACACCATTAAGAAGAAGTATAAGGTTGAGAAGAATAGGGTTTCCTCCCCAAACGGGTCTCCTTCCACTTGGCCCTTCTTCGATCGCTTAGACGTTTTGATTGGGCCTGCTTTGAGTGCAAAAAAGGCGTCTCCGTCGCCTCCGGTGGTACTTTCATTGCCGTATCATAAAACCCCGTCACCCGCATCTGCGGTGCGGGTGCTGCCACAGAAGCGTTCGGCCGCAGCACTATTAGGGGATGGTTTCTTCATGAGGAATTATTCAGCTATGGCTGCCGCGGCAGCTGCAGCAGAGGCTGATGAGGATGAGGATGAAGACGATGAAGAGGATGAAGATGAAGAGAGGGGAAGCGAGGTTGAGGAAGAAGAGAGGGAGAAGGAAGGGATGAGGAGCTTGGCAAAAGCAATAGAGAGGTTCGGGGAAGTTTATGAGAGAATGGAGAGAGAAAAATTGAGGCAGATGGTGGATTTGGAGAAACAGAGGATGCAGTTTAGTAAAGATTTGGAAGTACAAAGGATGCATATGTTCATGGACACGCAGGTTCAGTTGGGGAGGATCAAACGCGGGAAGCGATCTGGTTCTAATGGTGAGTTAGAACTTTCTCCTCCTCTTCATAAACTTTAG 870 0.5195 MGDSRDFLTPPVNHSRPMPVREDCWSEEATSTLVDAWGRRYIQLNRGNLRQKDWQDVADAVNALHGHTKKTHRTDVQCKNRIDTIKKKYKVEKNRVSSPNGSPSTWPFFDRLDVLIGPALSAKKASPSPPVVLSLPYHKTPSPASAVRVLPQKRSAAALLGDGFFMRNYSAMAAAAAAAEADEDEDEDDEEDEDEERGSEVEEEEREKEGMRSLAKAIERFGEVYERMEREKLRQMVDLEKQRMQFSKDLEVQRMHMFMDTQVQLGRIKRGKRSGSNGELELSPPLHKL 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0752 289 Coils Coil 211 231 - -
Lele14g0752 289 Pfam Myb/SANT-like DNA-binding domain 22 114 IPR044822 -
Lele14g0752 289 Gene3D - 25 91 - -
Lele14g0752 289 FunFam trihelix transcription factor ASIL2 25 91 - -
Lele14g0752 289 MobiDBLite consensus disorder prediction 176 213 - -
Lele14g0752 289 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 14 272 IPR044823 -
Lele14g0752 289 MobiDBLite consensus disorder prediction 267 289 - -
Lele14g0752 289 MobiDBLite consensus disorder prediction 179 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0752 Lele-ChrLele14 18545793 18546662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0752 21 277 Trihelix Transcription Factor Family AT3G14180 32.059 3.54e-43 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele14g0752 Myb_DNA-bind_4 2.4e-25 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g0752 14 18545793 18546662 Lele14g0752 14 18545793 18546662 ECH
Lele13g0855 13 20158200 20159476 Lele14g0752 14 18545793 18546662 ECH
Lele14g0752 14 18545793 18546662 Lele15g1623 15 9637014 9640411 hybridization
Lele14g0752 14 18545793 18546662 Lele16g1653 16 9594204 9595067 hybridization