Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0743 ATGGTTTACTGCTCTTATAATTCGATTTCTTCGTCTGGCTCCGATGTCTCGAGGCTGTTCAATCCAACTTCGCATAAAATTGTTGATTCTAATGGGGTTTCACAGAGTGGGTTGGCGTCACCGAATTCGTTGGTGTTGAATAGTGAGAAGGAGGATCTAATTAATTCCCCTATGAAGATAGGAAAGAAAGAGGCGTCTGAGGCAAAAGCTTTGGCTGCTATGAAGAACCACAGTGAAGCTGAGAGAAGGAGAAGGGAGAGAATAAATGGTCATCTCGATACACTTCGGGGTCTTGTGCCCAGCAATATGAAGATGGATAAAGCAACGTTATTGGGTGAAGTTATCAACCAAGTTAAGTTATTGAAGAAGAATGCAACAGAAGCAAGCAGAGGTTTTCTCATCCCAATGGATGATGATGAAGTTAAAGTTGAACCATACAACCATGAAGGAAGAGAAGGATCATCGATGTTTTACACGGCATCTATATGTTGCGATTACCGGCCGGAGCTACTATCTGAACTAAGACAGGCTCTTGATGGCCTTCAACTACAATTGATGAGGGCAGAAATATCAACTTTGGGAGGAAGGGTGAAGAATGTATTTTTCTTTAGATGCTGCAAATTAACAGAACATATGAATATTGAGGCATGCCAACTTGTTCCAAGAACTGTCCACCAGGTACTGAGTTCTGTGCTGGAGAAGGCTTCTGGCTCACTGGAATACTCTCTAGGAATGTCGTCACTTCGAAGCAAGCGTAGAAGACTTTGCTTCATTGAAACATCAACTTCCTCATGA 795 0.4239 MVYCSYNSISSSGSDVSRLFNPTSHKIVDSNGVSQSGLASPNSLVLNSEKEDLINSPMKIGKKEASEAKALAAMKNHSEAERRRRERINGHLDTLRGLVPSNMKMDKATLLGEVINQVKLLKKNATEASRGFLIPMDDDEVKVEPYNHEGREGSSMFYTASICCDYRPELLSELRQALDGLQLQLMRAEISTLGGRVKNVFFFRCCKLTEHMNIEACQLVPRTVHQVLSSVLEKASGSLEYSLGMSSLRSKRRRLCFIETSTSS 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0743 264 Coils Coil 171 191 - -
Lele14g0743 264 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 76 127 IPR036638 GO:0046983
Lele14g0743 264 Pfam Helix-loop-helix DNA-binding domain 76 121 IPR011598 GO:0046983
Lele14g0743 264 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 72 121 IPR011598 GO:0046983
Lele14g0743 264 PANTHER TRANSCRIPTION FACTOR BHLH30 34 259 IPR045847 GO:0003700|GO:0006355
Lele14g0743 264 SMART finulus 78 127 IPR011598 GO:0046983
Lele14g0743 264 Gene3D - 67 130 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0743 Lele-ChrLele14 18481706 18484126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0743 69 255 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 38.624 6.89e-34 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele14g0743 HLH 7.7e-10 No_clan