Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0742 ATGTTGTCTACTCCTTCATCTTCTTCCTCTAATCGGGTGCTGTCTTCCATAAAACTTCATGTCCTTGCTCGCATCAAAAAGTTTATCAAACCCAAAGCGACCCGAGTAAGCTCTGATTCATCTGATCAACTCGACATATCAATTACCAAAGCCGACAGCAACATCGACAAGGTTGAGAATTGTAAATCAGAGACGCAAGCTATGGAGAAACAGAGTTACGAGGAGGAGGAGTCTGTGATATCATTGAAGAGGTGTGTGAAGAAGTTTCACTTCGGGAGGTGGGAAGAGAAGGAGATGACGGCGAAAGAGATTGAACGCCTAGGCAAAGAAAATGTCAGGGTGAGAAAGCTGATAACAGAGCTCGGAGTGGTGCCGGAGCTGGTGTCAATGGTGGCGTCAGAGGTGGCTGGCCGGCGGCTAGCAGGGCTGAAGGTGTTGGTCCAGCTCGCTCATGGAAGTTACAAAAACAAGGCTTTGATAGTGGAGGCAGGTATATTCCCCAAGCTGCCAAAGAGAATTGACCTTGTGGATGAATCAACAAGAAGGGAATGCGCAGAACTGCTCTTAACATTGTCATCTCTAGCAAACAGCCAATTTCCTATTGCTTCATCAGATTTTCTCCCATTCATTAAAGACATCCTGGAATCAGATTCAAATGTTGAAACCAAGCAATCATGCCTGGGTGCTTTGTGCAACCTCTCAACTGTGTTAGAGAATATAGGGCCTTTAGTTTTTGCTGGGATTGTGCCAATCCTCTTGGAACTGTCCTCCATTAAAGAGAACTCAGAGAAAGCACTTGCTACTTTGGGGAACTTGGTGGTGACCTTGATGGGGAAAAAGGAAATAGAAAATAGCTTAATGATGCCAGAGAGTTTGATAGAGATCTTGATTTGGGACGATATACCTAAATGCCAAGAGTTGTCAGCTTATATTCTGATGATTCTAGCTCATCAGAGCTCATCACAAAGAGAAAAGATGGCAAAAGCAGGGATTGTCCCCGTTCTGCTTGAAGTGGCTCTCTTGGGCAGCCAATTAGCTCAGAAGAGAGCACTAAAGCTACTGCAATGGTTCAAGGATGAGAGGCAGTCAAAGATGGGACCACATTCTGGGCCACAAACAATAAGAATGGCAATGGGTTCACCCGTAAACCAAACGGAGGCAAAAGAGGGGAAGAGAATGATGAAGAGCTTGGTGAAACAGAGTTTGCATAGAAACATGGAAATCATTGCTCAGAGAGCCAATGCCTCTGGGGATCCTACTAAGTTGAAATCATTGCTTATCAGCACAAGTTCCAAGAGTTTGCCTTACTAA 1311 0.4485 MLSTPSSSSSNRVLSSIKLHVLARIKKFIKPKATRVSSDSSDQLDISITKADSNIDKVENCKSETQAMEKQSYEEEESVISLKRCVKKFHFGRWEEKEMTAKEIERLGKENVRVRKLITELGVVPELVSMVASEVAGRRLAGLKVLVQLAHGSYKNKALIVEAGIFPKLPKRIDLVDESTRRECAELLLTLSSLANSQFPIASSDFLPFIKDILESDSNVETKQSCLGALCNLSTVLENIGPLVFAGIVPILLELSSIKENSEKALATLGNLVVTLMGKKEIENSLMMPESLIEILIWDDIPKCQELSAYILMILAHQSSSQREKMAKAGIVPVLLEVALLGSQLAQKRALKLLQWFKDERQSKMGPHSGPQTIRMAMGSPVNQTEAKEGKRMMKSLVKQSLHRNMEIIAQRANASGDPTKLKSLLISTSSKSLPY 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0742 436 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 8 436 - -
Lele14g0742 436 SMART arm_5 153 193 IPR000225 GO:0005515
Lele14g0742 436 SMART arm_5 236 274 IPR000225 GO:0005515
Lele14g0742 436 SMART arm_5 194 235 IPR000225 GO:0005515
Lele14g0742 436 Gene3D - 79 287 IPR011989 -
Lele14g0742 436 SUPERFAMILY ARM repeat 89 360 IPR016024 -
Lele14g0742 436 Gene3D - 288 365 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0742 Lele-ChrLele14 18474860 18477362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0742 95 369 U-box Gene Family AT1G67530 30.496 3.46e-20 91.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g0742 14 18474860 18477362 Lele14g0742 14 18474860 18477362 ECH
Lele14g0742 14 18474860 18477362 Lele15g1634 15 9706284 9708937 hybridization
Lele14g0742 14 18474860 18477362 Lele16g1662 16 9658225 9660708 hybridization