Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0723 ATGATGGCCAAGCGGTGTGTTTTGGTTGAGTACCATGATGGTACTTATCAGCCAGTCATGGTTTCGATCTTGAGAAGGCTATCGACGACCGTGTTGTTACCCAGAGCATCTCTTTCCAAATTCATGGAGTCTTCTTCCAACGTCAATAGCAATTATAATGTGGGATCGCAGAGACTCCTCGCCTTAGCTCAGCAGCTTCGCCTTTACAAACCTCCATCATTTCCTGACGACATCGATGAGCAAACAATTGAAGAAAATGGGGGAAAGGTTGTTTCCCAAGTCGGATTTCCAGAGTCGACCACTCCAATTGCTGAAAACCCGGAAAAATTTAGACCTAAACGAGCTGCCGTTTTGATCTGCCTTTTCGAAGGGGATGCTGGGGATCTAAGGGTGATTCTAACTAAGCGATCATCCAAACTGTCTAGTCACTCGGGTGAAGTAGCCTTGCCTGGTGGGAAAGCAGATGAAGGGGATAAGGATGATGAGGATACTGCAAAAAGAGAGGCGAAGGAGGAAATTGGGTTGGACCCTGAACTTGTCAATGTCGTTACTTTTCTTGAACCATTCTTATCCAAGCACCTACTGAGAGTGGTTCCCGTCATTGGTATACTTCATGACAAGAGAGCATTTAAACCTGTTCTGAATCCTGCTGAAGTGGAATCGGTATTTGATGCACCTTTAGAAATGTTTCTCAAGGATGAAAATCGTTGTCAGGAGGAAAGGGAGTGGATGGGACAGAAGTATCTACTACATTTCTTTGACTACGAAACCGATCATAAAAAATATCTCATATGGGGTTTAACCGCTGGGATCTTGATTAGGGCTGCATCAGTGGTGTATCAACGGCCCCCAGCTTTCGTGGAGCAAAATCCTAGGTTCAAGTTTCCCCAGGATGTAAGCAAGGAATCTATTTGTCATGTTAAAAGAGAGGAACTTCGTGCCAGTTCATTTGTCATCCTTCCTGAAATTTCAAAGCTTCTTTCTTTGGCAAGTGAAGTTGCGATTCCCGGTGGGAAGAGAGAAGAAGGCGATGCTAACGATGTAGAAACAGCCTTGAGGGAGGCTAAGGAGGAGATTGGTTTGGACCCTTCTCTTGTTACCGTTATTACTTCTCTTGAGCCATTTGGCACTAAGCATAGTTATAAACATGCTAGCAATTTTTCTCGACATTGGTTACTTGACATTACATGTAAAAAATTTAAAGTTAGTGTAATGCATATGTTTAACTACAAACATGAATACATGATAAGAAACAAAATAAAAGGATTCAGTTTGTTTGGTGATTCTAATAATTTGTATCACATTTGA 1308 0.4235 MMAKRCVLVEYHDGTYQPVMVSILRRLSTTVLLPRASLSKFMESSSNVNSNYNVGSQRLLALAQQLRLYKPPSFPDDIDEQTIEENGGKVVSQVGFPESTTPIAENPEKFRPKRAAVLICLFEGDAGDLRVILTKRSSKLSSHSGEVALPGGKADEGDKDDEDTAKREAKEEIGLDPELVNVVTFLEPFLSKHLLRVVPVIGILHDKRAFKPVLNPAEVESVFDAPLEMFLKDENRCQEEREWMGQKYLLHFFDYETDHKKYLIWGLTAGILIRAASVVYQRPPAFVEQNPRFKFPQDVSKESICHVKREELRASSFVILPEISKLLSLASEVAIPGGKREEGDANDVETALREAKEEIGLDPSLVTVITSLEPFGTKHSYKHASNFSRHWLLDITCKKFKVSVMHMFNYKHEYMIRNKIKGFSLFGDSNNLYHI 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0723 435 CDD CoAse 113 273 IPR045121 GO:0010945
Lele14g0723 435 FunFam Nudix hydrolase 11 94 277 - -
Lele14g0723 435 Coils Coil 338 358 - -
Lele14g0723 435 MobiDBLite consensus disorder prediction 152 170 - -
Lele14g0723 435 PANTHER NUDIX HYDROLASE 324 380 IPR045121 GO:0010945
Lele14g0723 435 MobiDBLite consensus disorder prediction 142 170 - -
Lele14g0723 435 SUPERFAMILY Nudix 100 272 IPR015797 -
Lele14g0723 435 SUPERFAMILY Nudix 333 389 IPR015797 -
Lele14g0723 435 Pfam NUDIX domain 334 391 IPR000086 -
Lele14g0723 435 Pfam NUDIX domain 113 193 IPR000086 -
Lele14g0723 435 ProSiteProfiles Nudix hydrolase domain profile. 112 268 IPR000086 -
Lele14g0723 435 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 307 393 - -
Lele14g0723 435 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 97 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0723 Lele-ChrLele14 18381620 18386936 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g0723 14 18381620 18386936 Lele14g0723 14 18381620 18386936 ECH
Lele14g0723 14 18381620 18386936 Lele15g1647 15 9790924 9798202 hybridization
Lele14g0723 14 18381620 18386936 Lele16g1684 16 9760101 9765366 hybridization