Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0716 ATGGCTGTTCATGGCAAGCAAGATTCAGCTTCTGAAAGCATTCTTGAGAACGTGTGGTCCAAAATCATTAACAGCAATAATAATAATAATGGATCACAATGGGAAGAACTGCCTGATCTATATGAAAGAGAGGGATCTATGGAAGTTCTGAGAAGGCTTCCTAGTTTAGGAAGATGGATATCAATGGGAGCTGATTTCTGGGAAGAAATCTTAGATGGGTTTCCAGCTTGTAGCAGTAATAATGATTCAGGAATCTGCAGTGCTTTTGAATGCAATAAGAACGTTGAAGAAGAAGAAGAAGCAGAAGTGAGAGTGAAAGCAGAGAAGAAGGTCTCTGCAAAACACTACAGAGGAGTGAGAAGAAGGCCATGGGGGAAATATGCAGCAGAAATAAGAGACTCATCAAGGAAAGGAGCTAGGGTTTGGCTTGGGACTTTTGACACTGCTGAAGAAGCAGCTTTGGCTTATGACAAGGCTGCTTTGAGAATTAGAGGCCCAAAGGCATACCTGAATTTCCCACTTGAGACTGTTTCAAAGGAGTTAGGATTTGACCATCAAGGAAATTGCTGTCAAGAAAATTCCTGCAGTTCCAGAAAGAGAAGTAGGTATAGTGGGGGGAGAGATGAACTTGGTGTGATGAATGAAGAACCTGCAAAGAAGAAAATGGTACTAGGGAATGAAGAAGATGATGTTTTTGAGTTTCAGGACTTGGGAAATGATTATTTGGAAAGTTTGTTATCTTCATTTTGA 750 0.4067 MAVHGKQDSASESILENVWSKIINSNNNNNGSQWEELPDLYEREGSMEVLRRLPSLGRWISMGADFWEEILDGFPACSSNNDSGICSAFECNKNVEEEEEAEVRVKAEKKVSAKHYRGVRRRPWGKYAAEIRDSSRKGARVWLGTFDTAEEAALAYDKAALRIRGPKAYLNFPLETVSKELGFDHQGNCCQENSCSSRKRSRYSGGRDELGVMNEEPAKKKMVLGNEEDDVFEFQDLGNDYLESLLSSF 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0716 249 Pfam AP2 domain 115 165 IPR001471 GO:0003700|GO:0006355
Lele14g0716 249 ProSiteProfiles AP2/ERF domain profile. 115 173 IPR001471 GO:0003700|GO:0006355
Lele14g0716 249 SMART rav1_2 115 179 IPR001471 GO:0003700|GO:0006355
Lele14g0716 249 Gene3D AP2/ERF domain 114 175 IPR036955 GO:0003700|GO:0006355
Lele14g0716 249 PANTHER DNA-BINDING DOMAIN 96 244 IPR044808 GO:0003700|GO:0009873
Lele14g0716 249 FunFam Ethylene-responsive transcription factor 2 114 175 - -
Lele14g0716 249 CDD AP2 114 173 IPR001471 GO:0003700|GO:0006355
Lele14g0716 249 PRINTS Ethylene responsive element binding protein signature 139 155 IPR001471 GO:0003700|GO:0006355
Lele14g0716 249 PRINTS Ethylene responsive element binding protein signature 116 127 IPR001471 GO:0003700|GO:0006355
Lele14g0716 249 SUPERFAMILY DNA-binding domain 115 175 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0716 Lele-ChrLele14 18346405 18347154 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0716 14 249 AP2-EREBP Transcription Factor Family AT4G18450 35.065 1.86e-39 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele14g0716 AP2 2e-16 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g0716 14 18346405 18347154 Lele14g0716 14 18346405 18347154 ECH
Lele14g0716 14 18346405 18347154 Lele15g1654 15 9838698 9839264 hybridization
Lele14g0716 14 18346405 18347154 Lele16g1691 16 9800155 9800697 hybridization