Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0713 ATGGCTTCTTCAAACCCTAACAGACACTGGCCAAGCATGTTCAGGTCCAAGCCTTGCAAATCCCTCCACCACCACCAATGGAAGCACGACAACATCAACTCCTCCTTAATCTCGCCTTCAAGCTTCCACAGAACAACTTACGCATCAGGAGTTGAGGAGGAGAGAAGTGCAGAGCCAAAGCCAAGATGGAACCCAAAACCAGAGCAGATTCGAATACTGGAAGCCATATTCAACTCAGGGATGGTGAACCCTCCAAGAGACGAGATCAGGAAGATCAGAGCCCAACTCCAAGAATATGGCCAAGTCGGTGACGCCAATGTCTTCTACTGGTTCCAGAACCGTAAATCCAGATCCAAACACAAGCTTCGTCACCTCCACAACTCTTCTAACGCCCATCAAGCCCAAAACTCGAACAATTGCTCTCCCAAAGAAATCATAATACCACCTAATAAGCCACCATTAGTGTCTAATATTGTCTTCTCCGACGTCTCTTCTGATATTGTAGTTCCCATTTCTTCTGTTCCGCCGCCACCGCCACCGCCACCGCCACCGCCACCGCTGCCTCAGCCTTTCTTTTTTATTCCTGTGCATCAGCAGAATGGAGGAGCAGGAGGAGTGGCTAATAATGCTGTTCCTGTTCCTGTTCCTATTTCGCAAGGTTTTTGCTTATCTGAACTATCAAATGTGGTTCCACCTGAAGCTCCTCGTGATCATCATCATCAACAACAAATCAATGTTGGGTCTTGCACTAGTCTTTTGCTTAATGAAATCATGAATATCCATTCACCCTCAGAGAATGAGCAAGACAAGGTTATGCAAATGCAACAACACCCTCCAACCACTCGCCCTACTGTCCCTCCGGCAACTACCACAACTGTTACTGTTCCATCCCCCATTATCTCTCAGATTCAAGGCGTGGGTGAGGCGCCGGTGACGGAAGAGCGCCCACCTGGTGGTCCGATGAAATCGACGGTGTTCATTAACGACGTCGCATTTGAAGTGGGTGTGGGACCGCTCAACGTGCGGGAGGCCTTCGGCGATGACGCCGTGCTCATTCACGGCTCCGGTCAGCCTGTGCTCATCGACGAATGGGGCGTCACCCTTCAGCCTCTTCAGCACGGCGCGTTTTATTACCTGGTGTGCACGTTATCGAGAAACTGCTTTCATTTTCTTTTTATATTTTCGAAGTTAAGATCGAAAATGGGGGTGGGTGTTATTAATGAAGGTGTGGGTAAAGTTGATTGTTTCTTTGAAATATCTGGCACGGCAACAAAACGTAACCTAGCTGGAACGCCTAAGGATTTCTTGATATATGCAATTGCGATTATAGCGGAAGACGATTACGATTATCTCTTCAAGGTTGTCTTGATCGGTGACTCCGGCGTCGGCAAATCCAACCTCCTCTCCAGGTTCACCAAGAATGAGTTCAGTCGCGAATCCAAGTCCACCATCGGCGTCGAGTTCGCCACCCGAAGCATTCGCGTCGACGATAAGGTCGTTAAGGCCCAGATTTGGGACACCGCCGGTCAAGAAAGGTACCGAGCAATCACGAGTGCATATTACCGCGGAGCCGTTGGTGCTTTACTAGTCTATGACGTTACACGCAATGTAACATTCCAGAACGTGGAGAGATGGCTGAAGGAGCTACGGGGCCACACAGATGCCAACATTGTGGTGATGCTTGTGGGTAACAAGGCGGACCTCCGCCATTTGAGGGCGGTTTCTGTCGAAGACGCCACCGCATTCGCGGAGCAAGAGAACACATTCTTCATGGAAACATCAGCCCTGGAGTCCATGAATGTGGAGAATGCCTTCACAGAAGTGCTGTCTCAGATATATCGTGTGGTGAGCAAGAAGGCACTGGACATTGGGGATGATCCCTCTGCTTTGCCCAAGGGACAGACCATTAATGTTGGCTCTCGTGATGATGTATCAGCTGTGAAGAATGCTGGATGCTGCTCTTCTTGA 1968 0.4949 MASSNPNRHWPSMFRSKPCKSLHHHQWKHDNINSSLISPSSFHRTTYASGVEEERSAEPKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHKLRHLHNSSNAHQAQNSNNCSPKEIIIPPNKPPLVSNIVFSDVSSDIVVPISSVPPPPPPPPPPPPLPQPFFFIPVHQQNGGAGGVANNAVPVPVPISQGFCLSELSNVVPPEAPRDHHHQQQINVGSCTSLLLNEIMNIHSPSENEQDKVMQMQQHPPTTRPTVPPATTTTVTVPSPIISQIQGVGEAPVTEERPPGGPMKSTVFINDVAFEVGVGPLNVREAFGDDAVLIHGSGQPVLIDEWGVTLQPLQHGAFYYLVCTLSRNCFHFLFIFSKLRSKMGVGVINEGVGKVDCFFEISGTATKRNLAGTPKDFLIYAIAIIAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSRESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRNVTFQNVERWLKELRGHTDANIVVMLVGNKADLRHLRAVSVEDATAFAEQENTFFMETSALESMNVENAFTEVLSQIYRVVSKKALDIGDDPSALPKGQTINVGSRDDVSAVKNAGCCSS 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0713 655 PRINTS Transforming protein P21 ras signature 475 491 - -
Lele14g0713 655 PRINTS Transforming protein P21 ras signature 590 612 - -
Lele14g0713 655 PRINTS Transforming protein P21 ras signature 493 515 - -
Lele14g0713 655 PRINTS Transforming protein P21 ras signature 555 568 - -
Lele14g0713 655 PRINTS Transforming protein P21 ras signature 452 473 - -
Lele14g0713 655 ProSiteProfiles small GTPase Rho family profile. 445 616 - -
Lele14g0713 655 ProSiteProfiles small GTPase Ras family profile. 444 655 IPR001806 GO:0003924|GO:0005525
Lele14g0713 655 CDD homeodomain 59 121 IPR001356 GO:0003677
Lele14g0713 655 Pfam Ras family 453 613 IPR001806 GO:0003924|GO:0005525
Lele14g0713 655 FunFam ras-related protein RABA1f 444 653 - -
Lele14g0713 655 SUPERFAMILY Homeodomain-like 58 124 IPR009057 -
Lele14g0713 655 CDD Rab11_like 449 613 - -
Lele14g0713 655 SMART rab_sub_5 452 615 - -
Lele14g0713 655 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 380 IPR044557 GO:0003700|GO:0050793
Lele14g0713 655 FunFam WUSCHEL-related homeobox 11 60 127 - -
Lele14g0713 655 SMART ran_sub_2 457 652 - -
Lele14g0713 655 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 447 618 IPR027417 -
Lele14g0713 655 Gene3D - 444 653 IPR027417 -
Lele14g0713 655 ProSiteProfiles 'Homeobox' domain profile. 56 121 IPR001356 GO:0003677
Lele14g0713 655 SMART rho_sub_3 454 611 IPR001806 GO:0003924|GO:0005525
Lele14g0713 655 SUPERFAMILY Formin homology 2 domain (FH2 domain) 176 186 - -
Lele14g0713 655 Pfam Homeodomain 60 120 IPR001356 GO:0003677
Lele14g0713 655 TIGRFAM small_GTP: small GTP-binding protein domain 450 608 IPR005225 GO:0005525
Lele14g0713 655 SMART ras_sub_4 449 615 - -
Lele14g0713 655 Gene3D - 60 125 - -
Lele14g0713 655 ProSiteProfiles small GTPase Rab1 family profile. 447 653 - -
Lele14g0713 655 SMART HOX_1 58 125 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0713 Lele-ChrLele14 18328834 18334160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0713 1 129 Wox Gene Family AT2G33880 79.231 2.41e-59 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lele14g0713 Ras 5.1e-61 CL0023