Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0709 ATGCGTTTCTCTGACCTTCAAGTACTTGTAAGAGAGAGGGGGAGCGAGCCGAACCATATTGAAAACCACCAACACTATACGAAACTTGAAAAGGGTTTTGCTGCTATACCTTGCGGGTTAACAATGAAGAAGATTTCTAAGACCAGCTGCAAGTCAGCATCGCACAAGCTCTTTAAGGACAAGGCAAAGAACCGTGTTGATGATTTGCAGGTTATGTTCATGGATCTGCAGTTTGCTAGGAAGGAGAGTCGTACAGTTGATGCTGCTGTTCTTGAGGAGCAAGTCCACCAGATGCTTCGTGAGTGGAAAGCGGAGCTCAATGAGCCCTCCCCTGCTTCTTCTTTGCAGCAGGGTGGCAGTCTTGGGTCATTCTCAACCGATATCTGCCGGCTATTGCAGCTCTGTGAGGAGGAAGATGATGCTACCAGTCCATTAGCAGTGCCTAAGACTGAACCCAGTGTTCACAACCTACAAACTGGGTGTAATGTGATATTCCAAGAGGACCAAAAGCAACATGAATTCCCATTGGTATATGAGCGTAAGCATTCCACCTCAGGATTTTGCGGTGTGGCAAATAACTTTGAAGGAGCAACTTTAGAATATCAATTTGATTCGAATCAGGATTTTGATCGCAGCTTTTATGCTAGTTTTAATGATTCAGCTTTTCATGAGGAGGATAGCATTCCTTATGTAACTAGCTGTGTACCAAGTGTCTGGCCTCCTCCTTCTGCTTTCTTGGGCCCAAAATGTGCACTCTGGGACTGCCCAAGGCCTGTTCAAGGATTGGAGTGGTGTCAAGACTATTGCAGCAGCTTTCATGCTGCACTAGCATTGAATGAAGGGCCACCAGGCGTGGCCCCAGTCCTGCGACCTGGAGGAATCGGTTTGAAGGATAATTTGCTTTTTGCTGCTCTTCGTGCAAAGGCACAAGGAAAAGATGTTGGCATCCCAGAATGTGAAGGAGCAGCAACTGCTAAGTCTCCATGGAATGCGCCTGAGCTTTTTGATCTTTCTGTTCTTGAGGGCGAAAATATTAGGGAGTGGCTCTTCTTTGATAAGCCTCGAAGAGCATTTGAAAGTGGAAACAGAAAGCAGAGGTCATTGCCGGATTATAGTGGACGTGGTTGGCATGAATCTAGGAAGCAAGTGATGACCGAATTTGGTGGTCTGAAGAGATCCTATTATATGGACCCACAACCGCTGAACCATTTTGAGTGGCACCTTTATGAATACGAGATGAACAAGTGTGATTCATGTGCATTGTATCGGTTGGAGCTGAAGCTTGTAAATGGAAAGAAAAATTCCAAGGTGAAGGTAACGAGTGATTCAGTTGCTGATCTGCAGAAGCAGATGGGGAGGCTTTCTGCTGAGTTTCCACATGAAAACAAGCGGCCTACCAAAAGCAGGACCAAACTTAACGCGAAGGTTGGCATGGATGGTGTGTATTCTGCATCAAACAGAGTCGCTCCACTTAATGGAACATCCGAGTATGGATTAGCTGCACCGTATGACTATCTTGTTGAGAACATCAGCGACTATTATATAACATGA 1551 0.4571 MRFSDLQVLVRERGSEPNHIENHQHYTKLEKGFAAIPCGLTMKKISKTSCKSASHKLFKDKAKNRVDDLQVMFMDLQFARKESRTVDAAVLEEQVHQMLREWKAELNEPSPASSLQQGGSLGSFSTDICRLLQLCEEEDDATSPLAVPKTEPSVHNLQTGCNVIFQEDQKQHEFPLVYERKHSTSGFCGVANNFEGATLEYQFDSNQDFDRSFYASFNDSAFHEEDSIPYVTSCVPSVWPPPSAFLGPKCALWDCPRPVQGLEWCQDYCSSFHAALALNEGPPGVAPVLRPGGIGLKDNLLFAALRAKAQGKDVGIPECEGAATAKSPWNAPELFDLSVLEGENIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMTEFGGLKRSYYMDPQPLNHFEWHLYEYEMNKCDSCALYRLELKLVNGKKNSKVKVTSDSVADLQKQMGRLSAEFPHENKRPTKSRTKLNAKVGMDGVYSASNRVAPLNGTSEYGLAAPYDYLVENISDYYIT 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0709 516 PANTHER TRANSCRIPTION FACTOR VOZ1 42 510 IPR039277 GO:0006355|GO:0048578
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0709 Lele-ChrLele14 18298149 18301796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0709 44 515 VOZ-9 Transcription Factor Family AT1G28520 68.024 0.0 660
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Lele14g0709 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g0709 14 18298149 18301796 Lele14g0709 14 18298149 18301796 ECH
Lele13g0818 13 19909046 19914411 Lele14g0709 14 18298149 18301796 ECH
Lele14g0709 14 18298149 18301796 Lele15g1660 15 9874723 9880742 hybridization
Lele14g0709 14 18298149 18301796 Lele16g1698 16 9836266 9840063 hybridization