Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0704 ATGGCTTTGATCGATCTCAACACTACTGAGGACGACGAAACGCCGTCGTCGGGTTCCTCTGCTTCATTGTCTTCTCATTCCGGTATTAGCATTTCGGCCTCCACTTCTCCTTCTCCTTCTCCTTCGTCCGTCTGCTTGGAGCTATGGCACGCTTGTGCGGGTTCAATGATCTCGTTACCAAAAATAGGAAGCATCGTGGTTTACTTCCCTCAGGGCCACCTTGAGCAGCAGGCTCAGGATTTTCCGGTCTCTGCATACAAAATTCCACCTCATGTTTTCTGTCGCGTGGCAGATGTTAAACTTCATGCGGAGGAAGGTATAGATGAGGTGTACTGTCAGGTGTCGCTGGTTCCTGAAAGTGAGCAGGCTGAACGAAGATTTCGGGAAGGTGAAATCGGTGCTGACTGTGAAGATGAGGATGCTGCAGCTGCAGTGAAGTCTACAACACCACATATGTTCTGCAAGACCCTCACAGCTTCTGATACTAGCACTCACGGTGGTTTCTCTGTGCCTAGGCGAGCGGCTGAAGATTGCTTTCCCCAGCTGGATTACAATCAACAGCGTCCTTCACGAGAGCTTGTGGCAAAGGATCTGCATGGCCTGGAGTGGAGGTTCAGGCATATTTACAGGGCAGGGCAGCCTCGCAGGCATTTGCTTACAACTGGTTGGAGTGCATTTGTAAACAAGAAGAAGCTTGTGGCTGGAGATGCTGTGCTGTTTCTGAGGGGTGACGATGGAGTTCTGAGATTAGGCATTCGCAGGGCATCTCAGTTGAAATGTGGTGGTAACTTTTCAGTTCCATCTGGCCTGCATCTTAATCCCAGCAGTTTCATGGATGTGGTTAATGCAATATCTACAGGATGTGTCTTTAGCGTTTGCTATAACCCAAGGGCTAACTCGTCAGAGTTCATAATTCCACTCAACAAGTTTTTGAAGTGCCTTGATCAATTTTATTCAGTTGGAATGAGGTTCAGGATGCGTTTTGAAACTGAAGATGCTGCAGAACGAAGATGCACAGGATTGGTTGTTGGAATTAGTGATGCAGATCCTGTTAGATGGCCTGGATCCAAATGGAGAAGCCTTATGGTAAGGTGGGAAGACAGGGAAACCACTAGGCATAACAGGGTTTCCCTTTGGGAAATTGAGCCATCTAGTTCTGCTTCCACCCCCAACAACTTCAATGCAGCTGGTTTAAAGAGGACCAGGATCAGTTTGCCTTCTTCGAAACAAGAATTTCCAGTTCCAAATGGGATTGGAACATTGGACTTTGGGGAATCATCGAGGTTCCAGAAGGTCTTGCAAGGTCAAGAAATTTTGGGTGTTAATATTCCTTTTGATGGTATTAGTGCTCAGAGTCACCCCTTTTCTGAAATAAGGAGGTGCCATCCTGGTTCAAGTGTTTCTGGGATCGCCGCTTCAGGAAATAATTTCAGAATTCCACAAGTGCATTCTGATGTTCCGTGCAATGGCATAGGCTTCAGTGAATCCTTCCGATTCCAGAAGGTCTTGCAAGGTCAAGAAATACTTCCAAGCAAACCATATGGAAGAGCTTTTTCTGTTGATGTTCAAGGAAATGGTCGCAACGGAATTTTTGACAGTTGTCAAATGCCTCCGGGTTCCAGAAATGGATGGGCAGCCTCAGTACAGGATAATAATTCTGCCAATCTGCTCCCTTCTGTTCCATCCGGGCAAGTGATGTCACCATCATCTGTCTTCATGTTCCAGCAAGCAGTGAATCCTACTCCCAATGGTCACTACAATAATGGCATTACAAATCAGAGGATGGAGAGTAAAATGCAACATCAAGGACTGCATGCTTCTGAAATAAAAGCTGGAAAATTTGCATCAGTCTCATCTTTTGAGCCTAGTTTCTGTGGGCAAACTCACGGGAGAATGAAATCTATCGGCAGGATTGAGCACGATCAAATGGAGACTTTATCACACAATTCTGTATCGCCGCGGGGAGATGGGCAAGAGCTGATTTCTTCCTATAAAAGAAGCTGCAGGCTCTTTGGATTTTCATTGACTCAGGAAAATCACATTGCAAATTGCAAATGA 2058 0.4611 MALIDLNTTEDDETPSSGSSASLSSHSGISISASTSPSPSPSSVCLELWHACAGSMISLPKIGSIVVYFPQGHLEQQAQDFPVSAYKIPPHVFCRVADVKLHAEEGIDEVYCQVSLVPESEQAERRFREGEIGADCEDEDAAAAVKSTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPQLDYNQQRPSRELVAKDLHGLEWRFRHIYRAGQPRRHLLTTGWSAFVNKKKLVAGDAVLFLRGDDGVLRLGIRRASQLKCGGNFSVPSGLHLNPSSFMDVVNAISTGCVFSVCYNPRANSSEFIIPLNKFLKCLDQFYSVGMRFRMRFETEDAAERRCTGLVVGISDADPVRWPGSKWRSLMVRWEDRETTRHNRVSLWEIEPSSSASTPNNFNAAGLKRTRISLPSSKQEFPVPNGIGTLDFGESSRFQKVLQGQEILGVNIPFDGISAQSHPFSEIRRCHPGSSVSGIAASGNNFRIPQVHSDVPCNGIGFSESFRFQKVLQGQEILPSKPYGRAFSVDVQGNGRNGIFDSCQMPPGSRNGWAASVQDNNSANLLPSVPSGQVMSPSSVFMFQQAVNPTPNGHYNNGITNQRMESKMQHQGLHASEIKAGKFASVSSFEPSFCGQTHGRMKSIGRIEHDQMETLSHNSVSPRGDGQELISSYKRSCRLFGFSLTQENHIANCK 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0704 685 Pfam Auxin response factor 281 361 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele14g0704 685 Gene3D - 151 255 IPR015300 -
Lele14g0704 685 ProSiteProfiles B3 DNA-binding domain profile. 153 256 IPR003340 GO:0003677
Lele14g0704 685 SUPERFAMILY DNA-binding pseudobarrel domain 146 257 IPR015300 -
Lele14g0704 685 MobiDBLite consensus disorder prediction 1 37 - -
Lele14g0704 685 FunFam Auxin response factor 151 256 - -
Lele14g0704 685 FunFam Auxin response factor 317 388 - -
Lele14g0704 685 Pfam B3 DNA binding domain 153 255 IPR003340 GO:0003677
Lele14g0704 685 SMART B3_2 153 256 IPR003340 GO:0003677
Lele14g0704 685 CDD B3_DNA 151 254 IPR003340 GO:0003677
Lele14g0704 685 MobiDBLite consensus disorder prediction 9 37 - -
Lele14g0704 685 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 43 680 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lele14g0704 685 Gene3D - 317 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0704 Lele-ChrLele14 18258762 18263234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0704 40 519 B3 DNA Binding Superfamily AT5G60450 49.197 2.04e-134 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lele14g0704 B3 1.6e-20 CL0405