Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0695 ATGTTCCTGCCTGAAACAGACGATATTCACGACCTCTCGAAAGTTCCACACTTTTCTAGTCCTTTTGGTGAAATGCGCACCTTCCAGACAGTTCTTTTTCCTTCGCTAATAGCTATAGCTTTAACTCTAATTATATCTGTTGTACATGGCACCTAACGCAGAAGTATGGGTGTGGACTATTACAGGATTCTGCAGGTTGACAAGACTGCTACGGAGGAAGATTTGAAGAAAGCTTACCGGAAGCTTGCCATGACATGGCACCCTGATAAGAACCCAAACAATAAGAAAGAGGCTGAGGCCAAATTCAAACAAGTCTCGGAAGCCTACGAGGTTCTAAGTGATCCCCAGAAGAGAGCAATTTATGATCAGTATGGAGAAGAAGGACTCAAAGGGCCGGTGCCACCTCCAGATGCTGGTGGGGCTTCATTCTTCCAAACTGGAAACGGTCCAACGACGTTTAGGTTTAACCCCAGAAATGCAGACGACATTTTTGCTGAATTTTTTGGGTTTTCAAGCCCATTTGGTGGAATCGGCGGCGGCGGCGGCGGCATGAGAGGTGGCACAAGGTCCTTTGGTGGAATGTTTGGGGATGATATATTCAGCTCATTTGGAGAAGGCAGGCCTATTAGTCAACAAGGTCTACGGAAGGCACCTCCTATTGAAAACACATTGCCTTGCAGCCTTGAGTAG 690 0.4667 MFLPETDDIHDLSKVPHFSSPFGEMRTFQTVLFPSLIAIALTLIISVVHGTXRRSMGVDYYRILQVDKTATEEDLKKAYRKLAMTWHPDKNPNNKKEAEAKFKQVSEAYEVLSDPQKRAIYDQYGEEGLKGPVPPPDAGGASFFQTGNGPTTFRFNPRNADDIFAEFFGFSSPFGGIGGGGGGMRGGTRSFGGMFGDDIFSSFGEGRPISQQGLRKAPPIENTLPCSLE 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0695 229 ProSiteProfiles dnaJ domain profile. 59 125 IPR001623 -
Lele14g0695 229 ProSitePatterns Nt-dnaJ domain signature. 102 121 IPR018253 -
Lele14g0695 229 CDD DnaJ 59 114 IPR001623 -
Lele14g0695 229 Pfam DnaJ domain 59 122 IPR001623 -
Lele14g0695 229 MobiDBLite consensus disorder prediction 126 155 - -
Lele14g0695 229 SUPERFAMILY Chaperone J-domain 58 184 IPR036869 -
Lele14g0695 229 MobiDBLite consensus disorder prediction 201 229 - -
Lele14g0695 229 PRINTS DnaJ domain signature 97 117 IPR001623 -
Lele14g0695 229 PRINTS DnaJ domain signature 61 79 IPR001623 -
Lele14g0695 229 PRINTS DnaJ domain signature 117 136 IPR001623 -
Lele14g0695 229 PRINTS DnaJ domain signature 79 94 IPR001623 -
Lele14g0695 229 PANTHER DNAJ HOMOLOG SUBFAMILY B 59 203 - -
Lele14g0695 229 FunFam DnaJ subfamily B member 13 58 178 - -
Lele14g0695 229 SMART dnaj_3 58 117 IPR001623 -
Lele14g0695 229 Gene3D DnaJ domain 57 177 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0695 Lele-ChrLele14 18191466 18192481 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0695 54 124 C2H2 Transcription Factor Family AT1G74250 38.667 4.74e-10 57.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g0695 14 18191466 18192481 Lele14g0695 14 18191466 18192481 ECH
Lele14g0695 14 18191466 18192481 Lele15g1673 15 9973430 9976980 hybridization
Lele14g0695 14 18191466 18192481 Lele16g1710 16 9957031 9958698 hybridization