Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0682 ATGACTTCTTCGTCGTCTTCGCCTTCTTCTTCCATGTCGCGTGAGGGTCACTACAGAGGTGTGAGAAAACGACCGTGGGGTCGATACGCCGCCGAGATTCGTGACCCGTGGAAGAAAACGCGCGTTTGGCTGGGCACTTTCGACACTCCAGAAGAGGCGGCGCTGGCCTACGACGGTGCTGCACGTTCCCTCCGTGGTCCAAAGGCCAAAACCAACTTCCCTCCGTCTCCGGTGGCCACCGGAGGTCTCTCCCTCGACCTCAACGCCCCAACCTCTGATCATCGCTGGCCTCCCATTCCCTCCGGTCGCCTCGTGCTGAACGAGCTTCTCCATGCGGGTGTTCTCAAGGACACGTCTTTCGATCTTCCTCCGCCTTCGCCTGCAACTCCCATTGCTGCTATGGTTCACAACCGGCGTGACTGCCCTGTCTCCGTGGACGGTGGTCATCATCAGGTGCCTGAGAGCTCTCCCACGGCATCATTTCTCGGTCTTGTTCGGCGAGGCCTGCCGATCGACCTGAACGAACCTCCTCCTGTGTGGCCTTGA 546 0.5989 MTSSSSSPSSSMSREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGPKAKTNFPPSPVATGGLSLDLNAPTSDHRWPPIPSGRLVLNELLHAGVLKDTSFDLPPPSPATPIAAMVHNRRDCPVSVDGGHHQVPESSPTASFLGLVRRGLPIDLNEPPPVWP 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0682 181 FunFam Ethylene-responsive transcription factor 2 17 75 - -
Lele14g0682 181 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 10 106 - -
Lele14g0682 181 SMART rav1_2 17 80 IPR001471 GO:0003700|GO:0006355
Lele14g0682 181 ProSiteProfiles AP2/ERF domain profile. 17 74 IPR001471 GO:0003700|GO:0006355
Lele14g0682 181 Pfam AP2 domain 17 66 IPR001471 GO:0003700|GO:0006355
Lele14g0682 181 MobiDBLite consensus disorder prediction 1 20 - -
Lele14g0682 181 CDD AP2 17 76 IPR001471 GO:0003700|GO:0006355
Lele14g0682 181 PRINTS Ethylene responsive element binding protein signature 40 56 IPR001471 GO:0003700|GO:0006355
Lele14g0682 181 PRINTS Ethylene responsive element binding protein signature 18 29 IPR001471 GO:0003700|GO:0006355
Lele14g0682 181 Gene3D AP2/ERF domain 17 75 IPR036955 GO:0003700|GO:0006355
Lele14g0682 181 SUPERFAMILY DNA-binding domain 17 75 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0682 Lele-ChrLele14 18122097 18122642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0682 9 180 AP2-EREBP Transcription Factor Family AT1G28360 47.549 1.18e-41 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele14g0682 AP2 1.6e-14 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g0682 14 18122097 18122642 Lele14g0682 14 18122097 18122642 ECH
Lele14g0682 14 18122097 18122642 Lele15g1688 15 10046437 10046985 hybridization
Lele14g0682 14 18122097 18122642 Lele16g1726 16 10034725 10035270 hybridization